Pseudomonas oryzihabitans PRS08-11306: BJP27_16400
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Entry
BJP27_16400 CDS
T05074
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00550
Peptidoglycan biosynthesis
ppsl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJP27_16400
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppsl01003
]
BJP27_16400
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
BJP27_16400
Enzymes [BR:
ppsl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
BJP27_16400
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BJP27_16400
Glycosyltransferases [BR:
ppsl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
BJP27_16400
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
BJP27_16400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
PBP1c_linker_2
Motif
Other DBs
NCBI-ProteinID:
APQ13010
LinkDB
All DBs
Position
3655070..3657412
Genome browser
AA seq
780 aa
AA seq
DB search
MKRPRSSRSRKRKTFDWRRLSGWAVKLGLVALVALAGLCIYLDAVVQEKFSGKRWTIPAK
VYARPLELFNGVKLSRDDFLTELDALGYRREKTLDGPGSVSVGASTVDLDTRGFQFYEGM
EPPRAIRVRFAGSTVSSVTSLDGHNIAVARLEPLMIGGIYPAHNEDRILIKLDQAPPYLI
DGLVAVEDREFWHHHGVSPKSIARAIWVNATSGQVRQGGSTLTQQLVKNFYLTNERSITR
KGTEALMALLLELHYSKQEILEAYLNEVFLGQDGSRAIHGFGLAAQYFFGQPFSELKLQQ
VALLVGLVKGPSYYNPRRYPERALARRNLVLDVMAEQGVITPTEAEAAKAKPLGITKAGS
LTNSSFPAFVDLVKRQLKQDYRDEDLTEEGLRIFTSFDPILQTKAEAAMAEAMKRIDGRK
GAENVEAAMVVSNPETGEVQALLGGRDPRFAGYNRALDAVRQVGSLIKPAVYLTALERPS
KYTLTTLIQDEPFSVKGADGQVWRPQNYEHKAHGTIFLYQGLAHSYNLSTARLGLDLGVP
EVLKTVQRLGVSRELPPYPAVLLGAGALTPMEVSTMYQTIANGGFNTPLRSIRSVLAANG
EPLKRYPFQIEQRFDSGAIYLLQYAMQRVMREGTGRSVYNQIPASINLAGKTGTTNDSRD
SWFAGFSQDLLSVVWLGRDDNGKTPLTGATGALQVWTNFMRRADPVSLDMPVPDNVVQAW
VDATTGRGTDPSCPNAVQMPYIRGSEPPPGASCGAPAAPAADGNGKGGNPVMDWVKGWLN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaccccgatcctctcgttcccgcaagcgcaagaccttcgactggcgccgtctg
tccggctgggcagtcaagctcggtctggttgcgctggtagccctggcaggcctgtgcatc
tatctcgatgccgtggtccaggaaaaattctccggcaagcgctggaccattccggccaag
gtctatgcccgaccgctggaattgttcaacggcgtcaagctcagccgtgacgacttcctc
accgaactcgatgccctcggctatcgccgcgagaagaccctggatggtccgggtagcgtc
tccgtgggtgcgtccacggtcgatctggatacccggggtttccagttctatgaaggcatg
gagccgccgcgggcgatccgtgtacgcttcgccggcagcaccgtctccagcgtcacctcc
ctggacggccacaacatcgccgtggcccgcctcgaacccctgatgatcggcggcatctac
ccggcgcacaatgaagaccgcattctgatcaaactcgatcaggcgcccccctacctgatc
gatggcctggtcgcggtcgaggatcgcgagttctggcatcaccacggcgtctcgcccaag
tccattgcccgggccatctgggtcaatgccaccagcggccaggtgcgccagggcggcagt
accctgacccagcagttggtcaagaacttctatctcaccaacgagcgcagcatcacccgt
aagggcaccgaagccctcatggcgttgctcctggaattgcactacagcaagcaggaaatc
ctcgaggcctacctcaacgaggtgttcctcggtcaggatggctcgcgcgccatccacggc
ttcggtctggccgcccagtacttcttcggtcagcccttcagtgagctgaaactgcagcag
gtcgccctgctggtcggcctggtgaaggggccgtcctactacaatccgcggcgttatccc
gaacgcgccctggcccgccgcaacctggtgctcgacgtcatggccgagcagggtgtcatt
acccccaccgaggccgaggccgccaaggccaagccgctgggcatcaccaaggccggcagc
ctgaccaacagctccttcccggccttcgtcgatctggtcaagcgccagctcaagcaggac
taccgcgacgaagacctcaccgaagaaggcctgcgcatcttcaccagcttcgatcccatc
ctgcagaccaaggccgaagcggccatggccgaggccatgaagcgcatcgacgggcgcaag
ggtgcggagaacgtcgaggcggccatggtggtgagcaatccggaaaccggcgaggtccag
gccctgctcggtggccgcgatccccgcttcgccggctacaaccgggccctcgacgcggtc
cgccaagtcggctcgctgatcaagcccgcggtgtacctcaccgccctggagcgacccagc
aagtacaccctgaccaccctcatccaggacgagcccttctcggtcaagggcgctgacggc
caggtctggcgaccgcagaactacgagcacaaggcgcacggcaccatcttcctctatcag
gggctggcgcattcctacaacctgtccaccgcccggctgggtctggacctgggcgtgccc
gaggtgctcaagaccgtccagcgcctgggcgtgagtcgcgagctgccaccctatcccgcc
gtgctgctcggcgccggtgccctcacgccgatggaagtgagcaccatgtaccagaccatc
gccaacggcggcttcaacaccccgctgcgcagcatccgcagtgtgctcgccgccaatggc
gagccgctcaagcgctatcccttccagatcgagcaacgtttcgattccggcgccatctac
ctgctgcaatacgccatgcagcgggtcatgcgcgaggggaccgggcgttcggtctacaac
cagatcccggccagcatcaacctggcgggcaagaccggtaccaccaacgactcccgcgac
agctggttcgccggcttcagccaggatctgctctcggtggtctggctcggtcgtgacgac
aacggcaagacgcccctgaccggcgccaccggcgccctgcaggtgtggaccaacttcatg
cgtcgcgccgatccggtttcgctggacatgccggtacccgataacgtggtccaggcctgg
gtggatgccaccacgggtcggggcaccgatccctcgtgtcccaatgccgtacagatgcct
tatattcgcggcagtgagccgccaccgggcgcttcctgtggcgcgcccgccgcaccggcc
gccgacggcaatggcaagggcggtaatccggtcatggattgggtaaagggttggttgaat
tga
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