Pseudomonas oryzihabitans PRS08-11306: BJP27_16620
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Entry
BJP27_16620 CDS
T05074
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsl03016
]
BJP27_16620
Enzymes [BR:
ppsl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BJP27_16620
Transfer RNA biogenesis [BR:
ppsl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJP27_16620
Prokaryotic type
BJP27_16620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
APQ13042
LinkDB
All DBs
Position
3702199..3703113
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AA seq
304 aa
AA seq
DB search
MAQVKRIRRQVHGVLVLDKPRGFSSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYSTVAQLGVTTTTGDAEGEVLERRAVNVDEATIQAALPAFRGEIE
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIARLELLALQEDRATLEVACSKGTYV
RTLVEDLGARLGCGAHVAELRRTQAGPFGLAQAVSLEELEAAHAEGGAEALDRFLLPVDS
GLEHWPLVQLTQHSAYYWLHGQPVRAANAPKFGLMRVQDDQGRFIGIGEMNDEGQVAPRR
LIRS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaagcgtattcgccggcaggtgcatggcgtgctggtactggacaaaccg
cgcggcttttcctccaatgccgccttgcagaaggtccgctggctgctcaacgccgagaag
gcgggacataccggcagtctcgatcccctggccaccggcgtgttgccgctgtgcttcggt
gaggcgaccaagttttcccagtacttgctggacgccgacaagggctacagcaccgtggcg
cagctcggcgtcaccaccaccaccggtgatgccgagggtgaagtgttggagcgacgagcg
gtcaatgtggacgaagcgaccatccaggcggccttgccagcctttcgcggtgagatagag
cagattccgccgatgtactcggcgctcaagcgcgatggccagccgctctacaagctcgct
cgtgccggtgaagtagtggagcgcgaggcgcgttctgttactattgcccgcctggaactc
ctggcgttgcaagaagatcgcgcgacgctggaagtggcctgcagcaaggggacctatgtg
cgcaccctggtcgaagacctcggcgcccgtctcggttgcggggctcacgtggctgagttg
cgccgtacccaggccggtccctttggcctcgcccaggcggtgagcctggaagagttggag
gcagcccacgctgaaggcggtgccgaagcgctggatcgcttcctgctaccggtcgacagc
ggcctggaacactggccgctggtgcagttgacccagcacagcgcctactactggttgcac
ggtcagcccgtgcgggcggccaatgcgccgaaattcggcttgatgcgggtgcaggacgac
cagggtcgtttcatcggcatcggcgaaatgaatgacgaggggcaggttgctccccgtaga
ctgattcggtcctag
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