Pseudomonas oryzihabitans PRS08-11306: BJP27_17210
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Entry
BJP27_17210 CDS
T05074
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_17210
Enzymes [BR:
ppsl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BJP27_17210
DNA repair and recombination proteins [BR:
ppsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BJP27_17210
Prokaryotic type
BJP27_17210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BIR
AAA_28
Motif
Other DBs
NCBI-ProteinID:
APQ13150
LinkDB
All DBs
Position
complement(3824953..3826374)
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AA seq
473 aa
AA seq
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MSQLVWFRTDLRVHDHPALHAAAERGPVTAVFLLSPAQWQEHDEAAVKVDFWLRNLAELG
KALQALGIPLLIRTAERWAQAPQVLLELAQELSLDQLHFNDEYGLNEAARDEATAQAFAE
AGLKVHRYLDQTLFAPGTVLTKSGGYFKVFGQFKKTCLSRLELGLPTPLPAPRKQKSPST
PADTLPDTIDGFAAISAELQKRWPAGETAARERLQAFIRDDLDDYHQARDIPSEPGTSQL
SAYLNAGVLSPRQCLHAAVEANQGQLSGGSQGATTWITELLWREFYRHVLVGYPWVSRNQ
PFNRELAALPWRDDPEGLAAWQQGRTGIPIIDAAMRQLLQTGWMHNRMRMLTAMFLCKNL
LIDWREGERWFMRHLIDGDLASNNGGWQWSASTGTDSVPYFRVFNPHTQALKIDARGDYV
RTWVPELADLKGKAVHTPGARYLTPLVDLGESRQRALAAYRGLAKRADTKKPD
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagctcgtctggtttcgcaccgacctgcgcgttcatgaccaccccgccctccat
gccgccgccgaacgcggtccggtgaccgccgtcttcctgctgagcccggcgcagtggcag
gaacacgacgaggcagcggtcaaggtcgacttctggctgcgcaaccttgccgagctgggc
aaggcgctacaggccctgggtattccactgctgatccgcaccgcggagcgctgggcgcag
gcaccccaggtgttgctcgagctggcccaggaactgagcctcgaccagctgcatttcaac
gacgaatacggcctgaacgaagcggcgcgcgacgaggccaccgctcaagccttcgcagag
gccggcctgaaggtccatcgctacctggaccagaccctgttcgccccgggtaccgtgctg
accaagagcggcggctacttcaaggtcttcggccagttcaagaagacctgcctgagccgc
ttggaactgggtcttcccacgcccctgccggcaccgcgcaaacagaaatcacccagcact
ccggcggacaccctgccagacactatcgacggctttgcggcgatcagcgccgagctgcag
aaacgctggccagccggtgaaaccgcggcacgcgagcggctacaggcctttatccgtgat
gacctggacgactaccaccaggcccgtgacatcccctccgagcctgggaccagccagcta
tcggcctacctgaatgctggtgtgctgtcgccacgccaatgcctgcacgcggcggtcgag
gccaatcaggggcaactcagcggcggcagccagggggcaaccacctggatcaccgaattg
ctctggcgcgaattctatcgccatgtgctggtgggttatccctgggtctcgcgcaatcag
cccttcaaccgggaactcgccgccctgccctggcgcgacgatcccgagggcctagcggcc
tggcagcaggggcgcaccggcattcccatcatcgatgcggccatgcgccagctgttgcag
accggctggatgcacaaccgtatgcgcatgctgaccgccatgttcctctgcaagaatctg
ctgatcgactggcgcgaaggtgaacgctggttcatgaggcacctgatcgatggcgacctg
gcgtccaacaatggcggctggcagtggagcgcctccaccgggaccgattcggtgccctac
ttccgggtgttcaatccccatacccaggccttgaagatcgatgcccgcggcgactatgtg
cggacctgggtaccggagctggccgacctcaagggtaaggcggtgcataccccgggtgcg
cgctacctgacgccgctggtggatctcggtgaaagccgccaacgcgccctggccgcctac
cgcggcctggcaaagcgggcagatacaaaaaagccggactag
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