Pseudomonas oryzihabitans PRS08-11306: BJP27_17485
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Entry
BJP27_17485 CDS
T05074
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJP27_17485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_17485
Enzymes [BR:
ppsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP27_17485
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJP27_17485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
HypA
AAA_19
Trm112p
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
APQ13200
LinkDB
All DBs
Position
complement(3880948..3883161)
Genome browser
AA seq
737 aa
AA seq
DB search
MPLILRLALPSPLRRLFDYLPPKGVAEEQLRPGVRLRVPFGRREVVGVLIEVAQESEVPP
DKLRKALQLLDERPPLPSALFELCQWSAQYYQHSLGDTLSWALPALLRQGEPAERRLQRF
WIAQPNARPEDSRLARAPRQREALKTLRQHAHGVLHELLGQLGLVKDSLDLLLAKGLVKV
ETRYHQPTRHQGAWLAQAELPLNGEQRLAYEAVRAGSGFHCYLLEGVTGSGKTEVYLQLI
RATLEAGRQALLLIPEINLGPQTLGRFERRFNARIALLHSALTDRERMDIWLAARDGEVD
IVVGTRSALFTPLKHPGLIIVDEEHDASYKQQEGLRYHARDLAVVRARLENLPVVLGSAT
PSLESLHNAEQGRYAHLRLSLRAGGAQPPRFERLDVRSRPLDSGLSQPLLKAMGATLERG
QQVLVFLNRRGFAPTLLCHDCGWLAQCPRCDARMTYHRGSGELRCHHCDHRERPPRHCPS
CGKLDLRPVGAGTERAEERLQLLFPDVPVLRIDRDTTARKDALGKLLRTIHSGAPCILVG
TQMLAKGHHFPKVTLVAVLDADSGLFSADFRASERMAQQIVQVAGRAGRAEEPGQVLIQT
HLADHPLMVQLAEEGYPAFARQALQERRSAGLPPFAYLALLRADAHRQDQVENFLEAAYH
VAEGLAVNLALPQVELLGPVPAPMERRAGRHRAQLLLQSSSRAPLHRLLGIWVVQLESLP
EARQVRWSLDVDPIDLF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctgatcctgcgcctggcgctgccttccccactgcgccgcctgttcgactacctg
ccacccaagggcgtggccgaggagcagttgcgcccgggcgtgcgcctgcgggtgcccttt
ggccgccgtgaggtggtcggggtgctgatcgaagtcgcccaggagagcgaggtaccgccg
gacaagctgcgcaaggccctgcaattgctcgacgagcgcccgccgctgccgagcgccctg
ttcgaactctgccagtggtcagcccagtattatcaacacagcctcggcgataccttgagc
tgggcacttcctgcccttttgcgtcagggcgagccggcggagcggcggttgcagcgtttc
tggattgcccagcccaatgctcgcccggaagactcacggctggcccgcgcgcctcgccag
cgcgaggcgctcaagaccctgcgccagcatgctcacggcgtgctgcacgaattgctcggc
cagctcggtttggtcaaggacagcctcgacctgctgctggccaagggcctggtcaaggtg
gagacccgctatcaccagccgactcgccatcagggtgcttggctggcccaggccgaattg
ccgctcaacggcgaacagcgcctggcctacgaggcggttcgcgccggcagcggctttcat
tgctatctattggagggcgtgacgggcagcggcaagaccgaggtctatctgcaactgatc
cgcgccaccctggaagccggccgtcaggcgctgctgctgatcccggagatcaacctggga
ccccagacgctgggccgcttcgagcgacgcttcaatgcccgcatcgccctgctgcattcg
gcgctgaccgatcgcgagcgcatggatatctggctggccgcccgcgatggtgaggtggac
atcgtggtgggcacccgctcggcactgttcactccgctcaaacaccccggcctgatcatc
gtcgacgaagaacacgacgcctcctataaacagcaggaaggcctgaggtatcacgcccgg
gatctggctgtcgtacgcgcgcggctggaaaatctgccggtggtgctggggtcggcgaca
ccctcgctggagagcctgcacaacgccgagcagggtcgttacgctcacttgcggctgtcg
ctgcgtgccggtggggcccagccaccgcgcttcgagcggctggacgtacgcagccgcccg
ctggatagcggcctgtcgcagccgctgctgaaagccatgggcgcgaccctggaacgcggc
caacaggtgctggtgttcctcaatcgccgcggcttcgcacccaccctgctctgccacgac
tgcggctggctggcccagtgcccgcgttgcgatgcgcgcatgacctatcaccgcggctcc
ggcgagttgcgctgccaccattgcgatcaccgcgagaggccgccacgccactgcccgtct
tgcggcaagctcgacctgcgcccggtgggtgccggcaccgagcgtgccgaggagcgactg
cagctcctttttcccgacgtcccggtgctgcgcatcgaccgcgacaccacggcgcgcaag
gacgccctgggcaaactgttgcgcaccatccacagcggcgcgccctgcatcctggtcggc
acccagatgctcgccaagggtcaccacttccccaaggtgaccctggtggccgtactcgat
gccgacagcgggctgttctccgccgacttccgtgccagcgagcgcatggcgcagcagatc
gtccaggtggccggtcgcgccggtcgcgccgaggaacccggccaggtgctgatccagacc
cacctggccgatcatccgctgatggtgcaactggccgaggaaggctatccggccttcgct
cgccaggccctgcaggagcggcggtccgcgggactgccgccgttcgcctatctggccctg
ctgcgtgccgacgcccatcgccaggaccaggtggagaatttcctggaggcggcctatcac
gttgccgaaggcctggcggtgaatctcgccctgccccaggtggaattgctcggtccggtg
ccggcgccgatggaaagacgcgccggtcgtcatcgcgcccaactactattgcaaagcagt
agccgcgcgcccttgcatcgactgctgggcatctgggtggtccagttggaaagcctgccg
gaggcccgccaggtacgctggtcactggacgtcgaccccatcgatctcttctag
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