Pseudomonas oryzihabitans PRS08-11306: BJP27_17655
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Entry
BJP27_17655 CDS
T05074
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsl03021
]
BJP27_17655
Transcription machinery [BR:
ppsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJP27_17655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
Pept_S41_N
HTH_25
Motif
Other DBs
NCBI-ProteinID:
APQ13230
LinkDB
All DBs
Position
3921577..3922431
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AA seq
284 aa
AA seq
DB search
MTTSLQPVPTLVPGASLEAYVHSVNSIPLLTPERERELAERLFYKEDVEAARQLVLAHLR
FVVHIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAETLGVEPREVREMESRLTGQD
MAFDPASDADDDTAYQSPAQYLEDSRYDPARQLEEADWSDSSTANLHEALERLDDRSRDI
LYQRWLAEEKATLHELAAKYNVSAERIRQLEKNAMNKLKGNIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttcgttgcaacctgttcctacattggttcctggcgccagcctggaagcctat
gtgcactcggtgaacagcattccgctgctcactccggagcgggagcgtgaactggccgag
cgcctcttctacaaggaagacgtcgaggccgcccggcagttggtactcgcgcacctgcgt
ttcgtggtgcatatcgccaagagttattccggctatggcctggcccaagccgacctgatc
caagaaggcaacgtcggcctgatgaaggccgtcaagcgtttcaaccccgagatgggcgta
cgcctggtgtcctttgccgtgcattggatcaaggccgagatccatgagttcatcctgcgc
aactggcgcatcgtcaaggtggccaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaagaagcggctggcctggctgaacaacgacgaagtccatcgcgtagccgaa
accctgggcgtcgagccgcgggaagttcgcgagatggaaagccgcctgaccggtcaggac
atggccttcgatccggccagcgatgccgatgacgataccgcctaccagtcgccggcccag
tacctggaagacagccgctacgacccggcgcgtcagcttgaggaagccgattggagcgac
agctccactgccaatctgcacgaggccctggagcgtctggacgaccgcagccgcgacatc
ctctaccagcgctggctggccgaagaaaaggccacgcttcacgagctggcggccaagtac
aacgtctcggcggagcgtatccgccagttggaaaagaacgcgatgaacaagctcaagggc
aatatcgccgcctga
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