Pseudomonas oryzihabitans PRS08-11306: BJP27_18760
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Entry
BJP27_18760 CDS
T05074
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_18760
03036 Chromosome and associated proteins [BR:
ppsl03036
]
BJP27_18760
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BJP27_18760
Chromosome and associated proteins [BR:
ppsl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BJP27_18760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_AsnC-type
HTH_50
MarR_2
HTH_30
HTH_24
HTH_20
Sigma70_r4
P22_Cro
Cro
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
APQ13437
LinkDB
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Position
4154597..4155484
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AA seq
295 aa
AA seq
DB search
MIDYKLLEALAVVVEEGGFERAARRLGLSQSAVSQRIKLLEARVGQAVLVRETPPQPTAP
GLRLLRHIQQVRLLEADLGSEVPGLAEDAPQRLRIALNADSLATWWAAAVGPWVTQQAVL
LDLVVEDQDVVLRRMRAGEVAACLCASGQPLAGARVSALGAMRYRALASPAFCAQHLAEL
PDAQALARAPAIVFGPDDRLQHRYLEQLGVTQPFDYHLCPSAEGFLQLTLNGIGWGLLPD
IQSAAARARGALVDLAPGHWVDVPLFWHHWRNGGTPLQALTRHLERSAGEWLVRD
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactacaaattgctcgaagccctggccgtggtggtggaagagggcggcttcgag
cgcgccgcgcggcgtctggggctatcgcaatcggcggtctcccagcgcatcaagttgctc
gaggcccgggtcggccaggcggtgctggttcgcgagacaccgccccagcccaccgctccg
ggtttgcgcctgctgcgtcatatccagcaggtgcggctgctggaggctgatctgggcagc
gaggtacccggtctggccgaggacgcgccgcaacggctgcgcattgccctcaatgccgac
agcctggcgacctggtgggccgccgcggtggggccttgggtgacgcagcaggccgtgctg
ctggatctggtggtggaagaccaggacgtggtgctgcgccgcatgcgcgcgggcgaggtg
gcggcctgtctgtgcgccagtggccaacccctggccggcgcccgggtcagtgccctgggc
gccatgcgctatcgtgccctggccagtcccgccttctgtgcccaacacctcgccgagttg
ccggatgcacaggctctggcacgagcgccggccatcgtcttcggcccggacgatcgcttg
cagcaccgctacctcgaacaactcggcgtcacccagccgttcgactaccacctctgtccg
tccgccgagggctttttgcaactgaccctgaacggcatcggctggggcctgctgccggat
atccagagcgccgccgcccgcgcgaggggggcactggtggatctggcgcccggtcattgg
gtggacgtgccgcttttctggcatcactggcgtaacggcggcacgcctctgcaggccctg
acccggcacctggagcggagcgcgggcgagtggctggtgcgcgactag
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