Pseudomonas oryzihabitans PRS08-11306: BJP27_19000
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Entry
BJP27_19000 CDS
T05074
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BJP27_19000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_19000
Enzymes [BR:
ppsl01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
BJP27_19000
Transporters [BR:
ppsl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BJP27_19000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
DEAD
RsgA_GTPase
AAA_29
AAA_30
MMR_HSR1
NB-ARC
nSTAND1
nSTAND3
APS_kinase
DUF5906
NACHT
SLFN-g3_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
APQ14546
LinkDB
All DBs
Position
4214185..4215996
Genome browser
AA seq
603 aa
AA seq
DB search
MSQDSPAQTSSLKIYFRLLGYVRPYIGMFLLSIVGFLIFASSQPALAYVLKYFVDGLSNP
DAAMFPGKPIIGDLSLVKAVPLMIVFIAVWQGIGSFLGNYFLARVSLGLVHDLRIKLFNH
MLRLPNSYFDSNNSGHLISRITFNVTMVTGAATEAIKVVIREGMSVIFFFASLLWMNWKL
TLVMVAILPLIALMVTSASRKFRKQSNKIQSAMGDVTHITSEAIQGYRVVRTFGGEAYER
QRFLASSEANTEKQLTMTKTGAVYTPMLQLVIYTAMAVLMFLVLLLRGDASPGDLVAYIT
IAGLLPKPIRQLSEVSSTIQRGVAGAESIFEQLDEPAERDEGREERERVQGRLEVRNLTF
HYPGTDKAVLEGIDFVAEPGQMVALVGRSGSGKSTLANLIPRFYQHEQGKILLDGLEIQD
YRLSNLRRHIALVTQHVTLFNDSVTNNIAYGDLAGAPMEQVKAAAEAAYADEFIQRLPQQ
YDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDRVMQG
RTTLVIAHRLSTIEKADLILVMDHGRIVERGSHSELLALNGYYARLHAKQFEEVAPPAPT
IEC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagactcccctgcgcagacttccagcctgaagatctatttccgcctgctcggc
tacgtgcggccctacatcggcatgtttttgctgagcatcgtaggctttttgatatttgct
tcttcccagccagccttggcctacgtcctgaagtacttcgtcgatgggcttagcaaccct
gatgcggcgatgtttccgggtaagcccattattggtgatctcagcttggtaaaggctgta
ccactgatgatcgtctttatcgctgtctggcaaggtatcgggtccttcctcggtaactac
tttcttgcgagagtctcgctggggctagtgcatgacctgcggattaagctgttcaaccat
atgttgcgcctgcccaatagttacttcgattcgaacaactcgggtcatctgatttcgcgc
atcaccttcaacgtcaccatggtcaccggtgcggccaccgaggcaatcaaggtagtgatt
cgtgaaggcatgagtgtgatcttcttcttcgcttcgctgctgtggatgaactggaagttg
actctggtgatggtggcgatcctgccgctgatcgccctgatggtgaccagcgccagtcgc
aagttccgcaaacagagcaacaagatccaatcggccatgggcgatgtcactcacattacc
tccgaggctattcagggctatcgggtggtacgtactttcggtggtgaggcctacgagcgt
cagcgtttcctcgcatccagcgaggccaatacggagaaacagctgactatgaccaagacc
ggggcggtttatacgcctatgttgcagttggtgatctacacggcgatggctgtgctgatg
ttcctggtactgctactacgtggcgacgcctctcccggcgatttggttgcttacatcacg
atcgccggcctgctgcccaagccgatccgtcagctttccgaggttagctccaccatccag
cgcggcgtggccggggcggaaagcatcttcgagcaactcgacgaacccgccgagcgcgat
gaaggccgcgaagagcgcgagcgcgtccagggtcgcctggaggtgcgcaacctgaccttc
cattatccgggcaccgacaaggccgtgctggaaggcatcgacttcgtcgccgagccgggc
cagatggtggccctggtgggccgctcgggcagtggcaagtcgaccctggccaatctgatt
ccgcgcttctaccagcacgagcaaggcaagatcctgctcgatggcctggagatccaagac
taccggttgagcaacctgcgccggcacatcgccctggtgacccagcacgtcaccctgttc
aacgacagcgtcaccaacaacatcgcctatggcgatctggccggggcgcccatggagcag
gtcaaggcagcggccgaagcggcctatgccgacgagttcatccagcgcctgccgcagcaa
tacgacacccaggtcggcgagaacggggtgctgctctccggcggtcagcgccagcgcctg
gccatcgcccgggcgctgctgaagaacgcgccgctactgatcctcgacgaggccacctcg
gcgctggataccgaatccgagcgccacatccaggcggcgctggatcgcgtcatgcagggg
cgtaccaccctggtgatcgcccaccgcctctcgaccatcgagaaagccgacctgatcctg
gtgatggaccacgggcgcatcgtcgagcgcggcagccacagcgaactgctggcgctgaac
ggttactacgcgcgcctgcacgccaagcaattcgaggaggtcgcgccgccggcgccgacg
atcgaatgctga
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