Pseudomonas oryzihabitans PRS08-11306: BJP27_19590
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Entry
BJP27_19590 CDS
T05074
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_19590
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJP27_19590
Archaeal homologous recombinant proteins
BJP27_19590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
AAA_15
cobW
nSTAND3
NTPase_1
ABC_ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APQ13587
LinkDB
All DBs
Position
4336558..4339983
Genome browser
AA seq
1141 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSKVGGESNELMTRHTGDCLAEVEFAVRGERYRAFWSQRRARDQANGALQPPKVELAKLD
GSILAEKTGDKLRLTEELTGLDFERFTRSMLLAQGGFAAFLEASASQRAELLEELTGTAV
YGQISQRVFERAREAKVVLEGLRQRVAGVEVLDDERRQALTAEGASLAAREALLGEELKT
WQAQRQWLTELAQAATGEQQAQARLAAAQQAWDAAEPQRQRLALAEPAARLLPLEQAWRE
AQAREQLSRAELTQLDQRIQALAGQRDAALAQALGASLEQLRQAETEQADTLAEQQRLDA
SLAERPTHAELGERLGEWRSQLALRDERGEALARLTRRQQEQTRQLQLLAEERDALTVAV
ARARDQAGAAQAAEQAHLERWRTALDGRDEKAWRALWQAALGRVNEVDQLDQLVERQRQL
HTQLERLARTQGERQRQHDEHQVRLDALRGRYREVAQQVRERDKLLEQERVIRSLEAQRA
ELQPHEPCPLCGSREHPAVADYAALDVSATQTALQEAKAELERLTQEGKELSEALAALKA
QLEQLAEQQTEANQQLEQLGELWRQRCTALGADPAAPGAVAELRRRQDAELARIQQVLAT
LDGLRQQGEESRAEAQRMARQQADAEQRLALAEAAWERARQSLAEGADEQRAAEAQQAQA
ERQLAAELERWGFEVPSRAAEWLAERDQEWRAWQADSQRALALRQSLKDLEQRLATLAPL
VEQWRSRAAATAPAKVAPEAAAAILAEATQAWDDCREQGAALQGTRQSLQTRLDTETQTA
AEAGERWATALAASAFADADAWRAAQLDETERSALNAERANLDTALTEARALAGAAHERH
AALRAEPRTERSAAELDADLASGAAELRTLGQRQGEVGAALREDERRRVGLQALLVEIAA
QERDHDLWQHLNGLIGSADGAKFRKFAQGLTLDHLVHLANGQLQRLHGRYQLIRRQAAEL
ELQILDTWQADALRDIRTLSGGESFLVSLALALALSDLVSQRTGIDSLFLDEGFGTLDGE
TLEVALDALDQLNAGGKTIGIISHVEALKERIPVQLKVRKGVGLGHSGLERRYAVERGVA
D
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcaccctgcgcctgaagaacctcaattccctcaagggtgagtggaagatc
gacttcaccgccgagcccttcgccagcagcggcctgttcgccatcaccggacccaccggg
gcgggcaagaccaccctgctggatgccatctgcctggcgctctatcaccgcaccccgcgc
atgagcaaggtgggcggggagagcaacgaactcatgacccggcacaccggcgactgcctc
gccgaggtggaattcgccgtgcgcggcgagcgctaccgggcgttctggagtcagcgccgg
gctcgggaccaggccaacggcgccctgcaaccgcccaaggtcgaattggccaagctggac
ggcagcatcctcgccgaaaagaccggcgacaagctgcgcctcaccgaagaactcaccggc
ctcgatttcgagcgcttcacccgttccatgctgctggcccagggcggcttcgcggccttt
ctggaagccagtgccagccagcgtgccgaactgctggaagagctgaccggtacggcggtg
tacgggcagatctcccagcgggtgttcgagcgcgcgcgggaggccaaggtggtgctggag
ggcctgcgccagcgcgttgccggcgtcgaggtactggacgacgaacgccgccaggcgctg
accgctgaaggcgccagcctggcggcgcgcgaggcgcttttgggcgaagaactcaagacc
tggcaggcgcaacggcaatggctgaccgagttggcacaggcggcgaccggcgagcagcag
gcgcaagcccgcctggccgcggcgcaacaggcctgggatgccgccgaaccgcagcgccag
cggctggccctggccgaacccgctgcgcgcctgctgcctctcgaacaggcctggcgcgag
gctcaggcgcgcgaacagctcagccgtgcagaactgacccagcttgaccagcgtatccag
gccctggccggccagcgtgacgccgctctggcccaggccctgggcgccagtctcgaacag
ctgcgccaggccgagacggagcaggccgataccctggcggagcaacagcgcctggacgcc
agcctggccgagcgcccgacccatgccgagctgggcgaacgcctgggcgaatggcgcagc
caactggcactgcgtgatgagcgcggcgaagccctggcccgactcacgcggcgccagcag
gagcagacccgccagttgcagctgctcgccgaggagcgcgatgccctgacggtcgcggtg
gcccgggcacgcgaccaggcgggcgccgcccaggcagcggagcaggcgcatcttgagcgc
tggcggaccgccctggatggccgcgacgaaaaggcctggcgcgccctctggcaggcggcg
ctggggcgcgtcaacgaagtggaccaactggatcagttggtcgaacggcagcggcagcta
cacacccagctggagcgcctggcgcgtacccagggcgagcgccagcgtcagcacgacgag
caccaggtgcggctggacgccctgcgtggtcgctatcgcgaggtggcccagcaggtgcgc
gagcgcgacaagctgctcgagcaggaaagggtcatccgcagccttgaagcccagcgcgcc
gaattgcagccccatgaaccctgtccgctctgcggttcgcgcgagcacccggcggtggcc
gactacgccgcgctggacgtctcggcgacccagacggcgctgcaggaagccaaggccgaa
ctggaacgcctgactcaggaaggcaaggaactcagcgaagccctggccgcgctcaaggcg
cagctggagcagctcgccgaacagcagaccgaggccaaccagcaactggagcaactgggc
gagctctggcgccagcgctgcacggccctgggcgccgatcccgcggcacccggcgcggtg
gccgagctgcggcgccgccaggatgccgagctggcccgtatccagcaggtgctcgccacc
ctggatggcctgcgccagcagggcgaggagagccgcgccgaggcgcagcgcatggcccgc
cagcaggccgatgccgaacagcgcttggcgctggccgaggcggcctgggagcgggcccgc
cagagtctggccgagggcgcggacgagcagcgggcggccgaggcgcaacaggcccaggcg
gagcgccagctggccgcggagctcgagcgctggggctttgaggtgcccagtcgcgcggcc
gagtggctggccgagcgcgaccaggagtggcgcgcctggcaggccgacagccagcgtgcc
ttggccttgcggcagagcctgaaagacctcgagcagcgcctggccaccctggcgcccttg
gtggagcaatggcgcagccgggcggcggcaaccgcgcctgccaaggtggcgccggaggcc
gcggctgccatcctcgccgaggccacccaggcctgggacgactgccgtgagcagggcgcg
gccttgcagggcacccggcagtcgttgcagacacgactcgacactgaaactcagaccgca
gccgaggccggcgaacgctgggcgacggccctcgccgctagcgccttcgccgatgccgac
gcctggcgcgccgcgcagctggacgaaaccgagcgcagcgccctgaatgccgagcgggcc
aatctcgataccgctctgaccgaggctcgcgccctggccggggcggcccacgagcgccat
gccgcgctacgcgccgagccccgtaccgagcggagcgccgcggagctggatgccgacctc
gcgtctggcgccgccgagttgcgcaccctcggtcagcgccagggcgaagtcggggccgcc
ctgcgcgaagacgagcgtcgtcgcgtgggcttgcaggcgctgctggtcgagatcgccgcc
caggagcgcgaccacgacctctggcagcacctcaatggcctgatcggctcggccgatggc
gccaagttccgcaagttcgcccaggggctgaccctggatcacctggtgcacctggccaac
ggccaactgcagcggttgcacggtcgctaccaactgattcggcgccaggcagcggagctg
gaattgcagatcctcgacacctggcaggccgatgccctgcgcgacatccgcaccctgtcg
ggcggcgaaagcttcctggtcagcctggcccttgccctggcgctgtcggacctggtcagc
cagcgtaccggcatcgattcgctgtttctcgacgaaggtttcggcaccctggacggcgag
accctggaggtcgccctcgatgccctggaccagctcaacgcgggtggcaagaccatcggc
atcatcagccacgtggaagcgctcaaggagcgaattcccgtgcagctcaaggtgcgcaag
ggcgttggcctgggtcatagcggcctggaacgacgctatgcggtggagcgtggcgtagcc
gattga
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integrated database retrieval system
