Pseudomonas oryzihabitans PRS08-11306: BJP27_19660
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Entry
BJP27_19660 CDS
T05074
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJP27_19660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_19660
Enzymes [BR:
ppsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BJP27_19660
DNA repair and recombination proteins [BR:
ppsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJP27_19660
Prokaryotic type
BJP27_19660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APQ13600
LinkDB
All DBs
Position
4358406..4359098
Genome browser
AA seq
230 aa
AA seq
DB search
MDDDRIKLDPQWKAALRDEFEQPYMRQLGDFLRREKAAGKVIYPPGPLIFNALNTTPLDQ
VKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLQNIFKELKRDLNLPIPNHGHLQHWAE
QGVLLLNTSLTVEQANAGSHAKAGWQRFTDRIIEVVSAERENLVFLLWGSHAQSKQNLID
PQKHLILKSAHPSPLSAHRGFLGNGHFGRTNEFLRNAGLAPIDWALPPLA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgatcgcatcaagctcgacccccaatggaaagccgcgctacgtgacgagttc
gagcagccctacatgcgccagctgggcgatttcctgcggcgcgagaaggccgcgggcaag
gtcatctatccgcctggcccgctgatcttcaatgcgctcaacaccacgccgctggatcag
gtgaaggtggtcatcctcggccaggatccttaccacgggccggggcaggcccatggtctg
tgcttttcggtgcagcctggcgtgccggcgccgccctcgttgcagaacatcttcaaggaa
ctcaagcgcgatctgaatctgcccattcccaatcatggccatctgcagcactgggccgag
cagggcgtattgttgctcaacacctcgttgacggtggagcaggccaatgccggttcccat
gccaaggccggctggcaaagattcaccgaccggattatcgaggtggtcagcgccgagcgc
gagaacctggtgttcctgctctggggcagccacgcccagagcaagcagaatctcatcgat
ccccagaaacacctgatcctcaagtccgcccacccttcgccgctgtcagcccatcgcggt
tttctcggcaacggtcacttcggccgaaccaacgaattcctgcgcaacgctggtcttgcg
cccatcgactgggcgctgccgccgctagcctga
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