Pseudomonas oryzihabitans PRS08-11306: BJP27_19940
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Entry
BJP27_19940 CDS
T05074
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsl03009
]
BJP27_19940
Enzymes [BR:
ppsl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
BJP27_19940
Ribosome biogenesis [BR:
ppsl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BJP27_19940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
NNH1
RASSF8-10_RA
Motif
Other DBs
NCBI-ProteinID:
APQ13652
LinkDB
All DBs
Position
4425974..4426441
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AA seq
155 aa
AA seq
DB search
MRLRLIAVGSRMPRWVEEGWHEYVKRLPPELPLELVEIPLQTRGKNADVARLIRQEGEAM
LAKVQPGERVVTLEVTGKPWSTEQLAETLQQWRLEARTVNLMVGGPEGLAPEVQARSEQR
WSLSPLTLPHPLVRILVGEQLYRAWTVLAGHPYHK
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgcgtctcatcgccgtcggctcgcgcatgccgcgctgggtcgaggagggctgg
cacgagtacgtcaagcgtctgccgccggagttgccgctggaactcgtcgagatcccgctg
cagacccgcggcaagaatgctgacgtcgcccggctgatccgccaggaaggtgaggccatg
ctggccaaggtgcagccgggcgagcgcgtggtgaccctggaggtcaccggcaagccctgg
agcaccgagcaactggctgaaacactccagcagtggcgcctggaagcgcgcaccgtcaac
ctcatggtcggtggccccgagggcctcgcgcccgaggtgcaggcacggagcgaacagcgc
tggtcgctctcgcccttgaccctgccgcatccgttggtgcgcatcctcgtcggcgagcag
ctctatcgcgcctggaccgtgctcgccggccatccgtatcacaagtag
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integrated database retrieval system
