Pseudomonas oryzihabitans PRS08-11306: BJP27_20110
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Entry
BJP27_20110 CDS
T05074
Name
(GenBank) multidrug ABC transporter permease
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BJP27_20110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_20110
Transporters [BR:
ppsl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BJP27_20110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DUF87
AAA_22
AAA_29
FtsK_SpoIIIE
Zeta_toxin
AAA_23
AAA_21
AAA_25
AAA_33
MMR_HSR1
Semialdhyde_dh
Viral_helicase1
RsgA_GTPase
nSTAND3
ABC_membrane_3
Motif
Other DBs
NCBI-ProteinID:
APQ13684
LinkDB
All DBs
Position
4461154..4462887
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AA seq
577 aa
AA seq
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MALWRLLRDFFLRQRRAYGTAILCLLGVGLLNLTLPWWIGKAIDALRAGELDQNGLLWRV
ALILVVGFGLYVLRYQWRVRLFGTSYQVGVELRDAFFAKLARLDPGFFQSSRTGDLLARA
TQDIDAVETAAGEGVLASFDGMLTLLLVLLAMFIGIDAPLAALALLPFPFMAWGFYRVAR
RVQQRFGLALAGFSALNDRTQEALSGLRMLRQHALIEAELDDFDTRARSVAKADYQVQRT
EARYEPIIFVALSCATLLTLVMGSWRYLDGHITLGQLTSFSLYLVQLIWPMFAIGWCFNL
LQRGEAGARRLEEVFAVTERIRDEGTQTPPDQADLSVYIPAFTYPQARQPALQDVVIDLP
AGDTLGIVGATGSGKSTLLRLLLRQFPLEQGCIRLGGVPLEDYRLADLRAQFAYVPQDPF
LFARTLGENVALSRPDATAGEIREALDAAAFGTDLAALPQGLDTPVGERGLTLSGGQRQR
VALARALLSPAPILLLDDTLSAVDTATEARLLKTLAGLQGRTTLIVSHRLSAVQQADEII
VLDQGSLVERGRHAELLAAGGLYARLWTLQQAEEARQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtggcggttgttgcgtgattttttcctccgccaacggcgtgcctacgggacc
gccatcctttgcctgttgggcgtcggcctgctcaacctgaccctgccctggtggatcggc
aaggccatcgatgccctgcgcgcgggcgagctggatcagaacgggctgctctggcgcgtc
gccctgatcctggtggtcggctttggcctctatgtactcaggtatcagtggcgggtgcgg
ctgttcggtacctcctaccaggtcggcgtggagctgcgcgatgccttcttcgccaagctg
gcgcgcctcgatcccggcttcttccagtccagccgtaccggtgacctgctggcccgcgcc
acccaggacatcgacgccgtggagaccgccgcgggcgaaggagtgctcgccagtttcgac
ggcatgctgaccctgctgctggtactgctggccatgttcatcggtatcgatgctcccctg
gcggccctggcgctgctgccctttcccttcatggcctggggcttctaccgcgtggcgcgg
cgggtgcagcagcgcttcggcctggccctggcgggcttttctgcgctcaacgaccgtacc
caggaagccctgagcggcctgcgcatgttgcgccagcacgccctgatcgaagccgagctg
gacgacttcgacacccgtgcccgcagcgtcgccaaggccgactaccaggtgcagcgtacc
gaggcgcgttacgaacccatcatcttcgtcgccctgagttgcgccaccctgctgaccctg
gtgatgggcagttggcgctatctcgacggccatatcaccctcggccagttgaccagcttc
agcctctatctggtgcaactgatctggccgatgttcgccattggctggtgcttcaacctg
ctgcaacgcggcgaggcgggggcgcgccgactggaagaggtgttcgcggtgaccgagcgt
atccgcgacgagggcacccagacgccgccggaccaggccgatctgtcggtttatatcccg
gccttcacctatccccaggcgcgccagccggccttgcaggacgtggtcatcgacctgccc
gcgggcgacaccctgggcatcgtcggcgccacgggcagcggcaagagcaccctgctgcgc
ctgctcttgcgccagtttccgctggagcagggctgcatccgcctgggcggggtgccgctg
gaggactatcgactggccgacctgcgcgcccagttcgcctatgtgccccaggaccccttc
ctgttcgcccgcaccctgggcgagaacgtcgccctcagtcggccggatgccaccgctggc
gagatccgcgaagccctcgacgccgccgccttcggcaccgacctggcggccttgccccag
gggctggataccccggtgggcgagcgcggcctgaccctctcgggtggccagcgccagcgg
gtggccctggcccgggcactgctctcgccagcgcccatcctgctgctggacgacaccctc
tcggcggtggataccgccaccgaagcccggctgttgaagacactggccgggctgcagggg
cggaccaccctgatcgtcagccaccgcctctcggcggtgcagcaggctgacgagatcatc
gtgctcgaccagggcagtctggtggagcgcggccgccatgccgagttgctcgccgcgggc
gggctctatgcccgactctggactctgcagcaggccgaggaggctcgccaatga
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