Pseudomonas oryzihabitans PRS08-11306: BJP27_20115
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Entry
BJP27_20115 CDS
T05074
Name
(GenBank) ABC transporter
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BJP27_20115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_20115
Transporters [BR:
ppsl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BJP27_20115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
AAA
AAA_23
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APQ13685
LinkDB
All DBs
Position
4462884..4464629
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AA seq
581 aa
AA seq
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MTRTRVLSLLLKPVLANPRKLAGTLAILVIATLCDVLGPWLTKYYLDTYLVPHDLRLWPL
VALVAAYVVSQGLAAYGRYLQSLRFAEIAMDVVLLQRRRLFRHVLSLPQSFHDRTATGEL
VARVTNDTDALRELYVAFLGNMVGNIVLLIGILVAMALLDVRLMAIAVLLIPAAVLIVWA
YQRYSGAAAMEVRMLRAEQSARLGEAIGGMGLLQAFNQTERFRQDFQRLNRAQYGARMRT
IRVSGLLLRSALDLVSVAVLAVLLLVYGLGHLEGGAQIGVLYAFVTYLGRVTEPLMDITQ
RFNLFQQASVAGTRLLHLLEEKPALSGEDERPIATAHFHLDGVRFRHAGAGHDTLHGIDL
DIAPGTFLGIVGPTGSGKSTLLDLLAGLQPISGGSLCLDGRELGSLTPEVLGAALASVPQ
EPFIRSSSLRDNLLLGSQVPDARLRQALAAAHLDDLVARLPEGLDTLLGERGFTLSTGER
QLLALARALLREPKVLLLDEATASIDSATEARLQQALDELRGQVTLIVVAHRLSTIRHAD
RILVLRDGRKVEEGSHEELLQRPEGHYRRLWEQHAAGEKIA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggacgcgcgtgctctcgctgctgctcaagccggtactggccaatccgcgcaag
ctggccggcaccctggcgatcctggtcatcgcgacgctgtgcgacgtgctcggcccctgg
ctgaccaagtactacctggacacctatctggtgccccatgacctgcgcctgtggccgctg
gtggccctggtggcggcctatgtggtctcccaaggcttggccgcctatggccgatatctg
cagtcgctgagatttgccgagatcgccatggacgtggtgctcttgcagcggcgccgactg
ttccgccacgttctcagcctgccgcagagtttccacgaccgcaccgccaccggcgaactg
gtggcgcgggtgaccaacgacaccgatgccctgcgtgaactctatgtggccttcctcggc
aacatggtcggcaatatcgtgctgctgatcggcattctggtggccatggcgctgctcgac
gtgcggctgatggccatcgccgtgctgctgatcccggcggcggtgctgatcgtctgggcc
taccagcgatacagcggcgcggcggccatggaggtgcgcatgctacgtgccgagcagagc
gcgcggctgggcgaggccatcggcggcatggggctgttgcaggccttcaaccagaccgaa
cgcttccgtcaggattttcagcggctcaaccgggcccagtatggcgcgcgcatgcgcacc
atccgcgtctccggcctgttgctgcgctcggcgctggatctggtcagcgtggcggtgctg
gcggtactgctgctggtctacggcctggggcatctggagggcggcgcccagatcggcgtg
ctctatgccttcgtcacctacctggggcgggtgaccgagccgctgatggacatcacccag
agattcaacctgttccagcaggcctcggtggccggcacccggctgctgcatctgctggaa
gaaaagccggcgctgagcggcgaggacgaacgccccatcgccacggcgcacttccatctc
gacggcgtgcgcttccgccatgccggcgccgggcacgacaccctgcacggcatcgacctg
gacatcgcaccgggcaccttccttggcatcgtcgggccgacgggcagcggcaagtcgacc
ctgctcgacctgctcgccgggctgcagcccatcagcggcggcagcctctgcctggacggg
cgcgagctgggcagcctgacgcctgaagtactgggcgcggccctggccagcgtgccccag
gagcccttcatccgctccagcagcctcagggacaatctcttgctgggcagccaggtcccg
gatgcgcgactgcgccaggccctggccgccgcccatctggacgatctggtggcgcggctg
cccgaggggctggatacgctactgggcgaacgcggtttcacgctgtccaccggcgagcgg
cagttattggcgctggctcgggcactgctgcgcgagcccaaggtgctgctgctcgacgag
gccaccgccagcatcgacagcgccaccgaggcccggctacagcaggcgctggacgaattg
cgcggccaggtcaccctgatcgtggtggcgcatcggctctccaccatccgtcacgccgac
cgcatcctggtgctgcgtgatgggcgcaaggtggaggagggtagccatgaggagctgttg
cagcgacccgagggccactatcgccggctgtgggaacagcacgcggcaggggaaaagatc
gcgtaa
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