Pseudomonas oryzihabitans PRS08-11306: BJP27_20130
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Entry
BJP27_20130 CDS
T05074
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00330
Arginine and proline metabolism
ppsl00480
Glutathione metabolism
ppsl01100
Metabolic pathways
ppsl01110
Biosynthesis of secondary metabolites
ppsl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BJP27_20130
09106 Metabolism of other amino acids
00480 Glutathione metabolism
BJP27_20130
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
BJP27_20130
Enzymes [BR:
ppsl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
BJP27_20130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
APQ13688
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All DBs
Position
4467614..4468777
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AA seq
387 aa
AA seq
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MSIKVEDYYSRETFQKMKAFADQQETPFVVIDTATISRAYDDLVGNFPFAKIYYAVKANP
AIEITELLRDKGSNFDIASRYELDKVMSAGVGPERISYGNTIKKARDVRYFYEKGIRLFA
TDSEADLRNIAKAAPGAKVYVRILTEGSDSADWPLSRKFGCNPDMALDLLILAKQLGLEP
YGISFHVGSQQRDIDVWDAAIAKVKVIFQRLKEEDGITLKMINMGGGFPANYIQRTNSLE
TYAEEIIRFLKEDFGDELPEIILEPGRSLIANAGILVSEVVLVARKSRTSVERWVYTDVG
KFSGLIETMDESIKFPIWTDKKGEMEEVVIAGPTCDSADIMYEQYKYGLPLNLASGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaaggtcgaagattactattctcgcgaaaccttccagaagatgaaggccttc
gccgaccagcaggaaacccccttcgtcgtcatcgataccgccaccatttcgcgggcctat
gacgatctcgttggcaacttcccgttcgccaagatctactacgcggtcaaggccaacccg
gccattgagatcaccgagttgctgcgcgacaagggctcgaacttcgacatcgcctcgcgc
tacgagctggacaaggtgatgtccgccggggtcggtccggagcgcatcagctacggcaac
accatcaagaaggcgcgcgacgtccgttacttctacgagaagggcatccggctgttcgcc
accgactctgaagccgacctgcgcaacatcgccaaggccgctccgggcgccaaggtctat
gtgcgtatcctcaccgagggttccgattccgccgattggccgctgtcgcgcaagttcggc
tgcaaccccgacatggccctggacctgctgatcctggccaagcaactgggtctggagccc
tatggcatctccttccacgtgggtagccagcagcgcgacatcgacgtctgggacgccgcc
atcgccaaggtcaaggtgatcttccagcgcctcaaggaagaagacggcatcaccctgaag
atgatcaacatgggcggtggcttcccggccaactacatccagcgcaccaacagcctggag
acctatgccgaggagatcatccgcttcctcaaggaagacttcggcgacgagctgccggaa
atcatcctggagccaggtcgttcgctgatcgccaacgccggcatcctggtcagcgaagtg
gtgctggtggcgcgtaagtcgcgtacctcggtggaacgctgggtctacaccgacgttggc
aagttttccggcctgatcgaaaccatggacgagtccatcaagttccccatctggaccgac
aagaagggcgagatggaagaggtggtgatcgccggcccgacctgcgacagcgccgacatc
atgtacgagcaatacaagtacggcctgccgctgaacctggccagtggtgatcgcctgtac
tggctgtccaccggtgcctacaccaccagctacagtgcggtggaattcaacggcttcccg
ccgctgaagtccttctacctgtaa
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