Pseudomonas oryzihabitans PRS08-11306: BJP27_21540
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Entry
BJP27_21540 CDS
T05074
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl01501
beta-Lactam resistance
ppsl02020
Two-component system
Module
ppsl_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJP27_21540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BJP27_21540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_21540
01504 Antimicrobial resistance genes [BR:
ppsl01504
]
BJP27_21540
Transporters [BR:
ppsl02000
]
Other transporters
Pores ion channels [TC:
1
]
BJP27_21540
Antimicrobial resistance genes [BR:
ppsl01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
BJP27_21540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
APQ13953
LinkDB
All DBs
Position
complement(4790729..4792048)
Genome browser
AA seq
439 aa
AA seq
DB search
MQAMKWSVIALAVAAGTTQMAFADQQSESKGFVEDSKLTLLNRNYYFNRDLTNRTDGEVR
RDRIDWTQGFLMNYSSGFTQGTVGVGVDAYGYLGLKLDGGRGTSGTGNLPTNSRGEPADE
YSTAGAAVKVRVSNTVLKYGNLQPTSPVFALGGSRLFPANGTGFMLTSEEIDKLFLEAGY
FTAARDGIQTFHDGDIGTSYSGETARSASYAGGKYSFNDQLSASIYYGKMKDLWNQYYGN
LNYVQPLSANQSLTFDANYYYTKDTGSAKLGDISNNAFSLAAAYSIDAHTFTLGFQKVNG
DTPFDYAAAETGGGGDGIFLANSIQYSDFNAPGEKSWQARYDLNMATLGVPGLSFMARYV
RGTGIDAAGAETGYAGGSFPYQDGDAERETNVEAKYKIQSGAAKDLSFRVRQSWHRGSDS
TGGHINEFRIITEYPLNIL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgatgaagtggagcgttatcgccctggcagtagccgcagggaccactcaaatg
gcattcgccgatcaacagtccgaatccaagggcttcgttgaagacagcaagctgaccctg
ctgaaccggaactactacttcaaccgggacctgacgaaccgtacggatggtgaagtccgc
cgtgatcgcatcgactggactcagggcttcctgatgaactactcgtcgggcttcacccag
ggcaccgtgggtgtcggcgtggatgcctacggttacctgggcctcaagctcgacggcgga
cgtggtacctctggtactggcaacctgcccaccaatagccgtggcgaacctgcggacgaa
tactccaccgctggcgctgccgttaaagtccgggtatccaataccgtgctgaagtacggc
aacctgcagcccacctcgccggtgttcgccctgggtggcagccgcctgttcccggctaac
ggcaccggcttcatgctgaccagcgaagaaatcgacaagctgttcctcgaagcgggttac
ttcaccgctgcacgtgacggcatccagaccttccacgacggcgacatcggcacctcctac
tcgggcgagactgctcggtccgcctcctacgcaggtggcaagtacagcttcaacgaccag
ctctccgcatctatctactacggcaagatgaaggatctctggaaccagtactacggcaac
ctgaactacgttcagccgctgagtgccaaccagtccctgaccttcgatgccaactactac
tacaccaaggataccggcagcgccaaactgggcgatatcagcaacaacgccttctctctg
gctgccgcctatagcatcgatgcccacaccttcaccctgggcttccagaaggtcaacggc
gatactcccttcgactacgcagcggctgaaaccggtggtggtggcgacggcatcttcctg
gccaactccatccaatactcggacttcaacgcacccggcgagaaatcctggcaggctcgt
tacgacctgaacatggctaccctgggcgtgccgggacttagcttcatggctcgttatgtt
cgtggcaccggtatcgatgccgccggcgctgagaccggttacgccggtggaagcttccct
tatcaagacggcgacgcagagcgcgaaaccaacgtggaagccaagtacaagatccaaagt
ggcgccgccaaagacctatccttccgcgttcgccaatcctggcaccgtggcagcgatagc
accggtggtcacatcaacgagttccgcatcatcaccgagtacccgctgaacatcctctaa
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