Pseudomonas oryzihabitans PRS08-11306: BJP27_21750
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Entry
BJP27_21750 CDS
T05074
Name
(GenBank) porin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_21750
Transporters [BR:
ppsl02000
]
Other transporters
Pores ion channels [TC:
1
]
BJP27_21750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
Opacity
TSP_3
DUF748
Motif
Other DBs
NCBI-ProteinID:
APQ13992
LinkDB
All DBs
Position
4840793..4841848
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AA seq
351 aa
AA seq
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MKLKSTLGVVIGSLLASASLSALAQGQGAVETELFGSRLFTDSSRNMTNADLYGGSVGYF
LTDDVELALSYGEYHNARGDHDLGHKNIKGSLAALDAYYHFGQPGVGLRPYVSGGFAHQS
ISNRDINQGGRDRSTYANVGAGLKYYFTENLYARTGVQANYNIDYGDTEWSAAVGVGLNF
GGSTKKAVAPAPAPAPVADVCTDSDNDGVCDNVDKCPNTPANVTVDANGCPAAAETVRVE
LDVKFDFDKAVVKPNSYADIKNLADFMQQYPQTSTTVEGYTDSVGTEAYNQKLSERRANA
VRNVLVNQYGVQGSRVNAVGYGEAHPVADNATEAGRAVNRRVEASVEAQAK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaagagcaccttgggcgtcgtgatcggctccctgctggcaagcgcctcgctg
agcgccctggcacaaggtcaaggcgccgtcgagaccgagctgttcggtagccgtctgttc
actgacagctcccgcaacatgaccaacgccgacctgtacggcggttccgttggctacttc
ctgaccgacgacgttgagctggcgttgtcctacggcgagtaccacaacgctcgtggcgat
cacgacctgggtcacaagaacatcaagggcagcctggctgcgctggatgcctactaccac
ttcggtcagcccggcgtcggtctgcgtccgtacgtgtccggtggcttcgctcaccagtcc
atcagcaaccgcgacatcaaccagggtggtcgtgatcgctccacctacgccaacgttggt
gccggtctgaagtactacttcaccgagaacctgtacgcccgtaccggcgtgcaagccaac
tacaacatcgactacggcgataccgagtggagcgctgctgtaggtgttggtctgaacttc
ggtggttccaccaagaaagccgttgccccggctccggccccggctcctgttgccgacgtc
tgcaccgactccgacaacgacggcgtctgcgacaacgtcgacaagtgcccgaacactccg
gccaacgtcaccgttgacgccaatggctgcccggctgccgccgaaaccgttcgcgtcgag
ctggacgtgaagttcgatttcgacaaggccgttgttaagcccaacagctatgccgacatc
aagaacctggctgatttcatgcagcagtacccgcagacctcgaccactgttgaaggctac
accgactccgtcggcaccgaagcctacaaccagaagctgtccgagcgtcgtgccaacgcc
gtgcgtaacgtgctggtcaaccagtacggcgtgcagggcagccgcgtgaacgccgttggt
tacggtgaggcccacccggttgctgacaacgccaccgaagccggtcgcgctgtcaaccgt
cgcgtagaagcctcggtcgaagctcaggccaagtaa
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