Pseudomonas oryzihabitans PRS08-11306: BJP27_21770
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Entry
BJP27_21770 CDS
T05074
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00020
Citrate cycle (TCA cycle)
ppsl00190
Oxidative phosphorylation
ppsl00650
Butanoate metabolism
ppsl00720
Other carbon fixation pathways
ppsl01100
Metabolic pathways
ppsl01110
Biosynthesis of secondary metabolites
ppsl01120
Microbial metabolism in diverse environments
ppsl01200
Carbon metabolism
Module
ppsl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppsl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppsl_M00149
Succinate dehydrogenase, prokaryotes
ppsl_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BJP27_21770
00650 Butanoate metabolism
BJP27_21770
09102 Energy metabolism
00190 Oxidative phosphorylation
BJP27_21770
00720 Other carbon fixation pathways
BJP27_21770
Enzymes [BR:
ppsl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BJP27_21770
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
FAD_binding_3
Thi4
FAD_oxidored
Pyr_redox_3
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
APQ13996
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Position
4844359..4846131
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AA seq
590 aa
AA seq
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MSTIRHISFDAIIVGGGGAGMRAALQLAQSGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAAADRTGHALLHTLYQGNLKNNTVFLNEWYAVDLVKNQDGVV
VGVIAICIETGETVYVKSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEV
LAGNGCGPNGDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GIATNIHGQAITQDANGNDKIIEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALKDGIEHRGASESDLEASLQRLSGVNERTTGEDVATLRKQLQTCMQNYFGVFRTGE
YMQKGIAELAQLRERIAKVKINDKSQGFNTARIEALELQNLLEVAEATAIAAENRKESRG
AHAREDFEERDDENWLCHTLYFPGEKRVSKRGVNFAPKTVPMFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaattcgtcatatttcgtttgatgccatcatcgtaggtggcggcggcgccggt
atgcgcgcggccctgcaactggcccagtccggtcacaagaccgcggtgatcaccaaggtt
ttcccgacccgttcgcataccgtgtccgctcagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgacgattggcgctggcacatgtacgacaccgtcaaggggtcggactac
atcggtgaccaggacgccatcgaatacatgtgctccgtcggtccggaagcggtcttcgaa
ctcgagcacatggggctgccgttctctcgtaccgagcagggccgtatctatcagcgcccc
ttcggcggtcagtccaaggactacggcaagggtggccaagccgcgcgtacctgcgccgcg
gccgaccgtaccggtcacgctctgctgcacaccctctatcagggcaacctgaagaacaac
acggtgttcctcaacgagtggtatgccgtggacctggtcaagaaccaggatggcgtcgtg
gttggcgtcatcgccatctgcatcgagaccggcgaaaccgtctatgtcaaatccaaggct
accgtgctggctactggcggtgccggtcgtatctatgcctccaccaccaatgccctgatc
aataccggtgatggcgtgggcatggccctgcgcgccggcgtgccggtgcaggacatcgag
atgtggcagttccacccgaccggcatcgccggcgctggggtactggtcaccgaaggttgc
cgcggtgaaggcggctatctgatcaacaagcacggcgagcgcttcatggagcgttatgcg
cccaacgccaaggatctggccggccgcgacgtggtcgcccgttccatggtcaaggaagtg
ctggccggcaacggctgcggtcccaatggcgaccacgtgctgctgaagctggaccacctc
ggcgaagaggtgttgcacagccgcctgcctggcatctgcgagctatccaagaccttcgcc
cacgtcgatccggtcgtcgctccggtccccgtgatccccacctgccactatatgatgggc
ggcatcgccaccaacatccatggccaggccatcactcaggacgccaacggtaacgacaag
atcatcgaaggcctgttcgccgtgggcgaagtggcttgcgtgtccgtgcatggcgccaac
cgcctgggtggcaactcgctgctggacctggtggtcttcggtcgtgcggctggtctgcac
ctggagaaggcgctcaaggacggcattgagcaccgcggtgcgtcggaaagcgatctggaa
gcctcgctgcagcgcctgtccggcgtcaacgagcgcaccaccggcgaagacgtcgctacc
ctgcgcaagcagctgcagacctgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaagggtatcgctgagctggcgcagctgcgcgagcgtatcgccaaggtcaag
atcaacgacaagagccagggcttcaacaccgcccgcatcgaggcgctcgagctgcagaac
ctgctcgaagtggccgaggcgaccgccatcgccgccgagaaccgcaaggagtcccgtggt
gctcacgctcgcgaagacttcgaggagcgcgacgacgagaactggctgtgccacaccctc
tatttccccggtgaaaagcgggtcagtaagcgtggagtcaacttcgcgcccaagaccgta
ccgatgttcgaacccaaggttcggacttactaa
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