Pseudomonas oryzihabitans PRS08-11306: BJP27_22020
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Entry
BJP27_22020 CDS
T05074
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJP27_22020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_22020
Transporters [BR:
ppsl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BJP27_22020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Motif
Other DBs
NCBI-ProteinID:
APQ14045
LinkDB
All DBs
Position
complement(4895542..4897104)
Genome browser
AA seq
520 aa
AA seq
DB search
MFSSSRTCVSSASRMLALVSLLGLGAWQPASAATATDTLVIGKPADLQTVDPGVTFDNND
WTVTYPAYQRLMRYKVEDGKGSTDVEGDLASGWTVSPDNLVWTFTLKPGNKFDDGSEVTA
EAVKFSIERLMKLKQGPSSIFPADMTVTVVDPQTVKFTLQKPFAPFLFALAHDGASVINP
KVASAHGKDVDAWLAGHTAGSGAYRLAAWQKGQSLTLEPNPHYAGKAPTLKQVVIRIIAE
PSVRRLQLEQGDLDIIEDLPEDQVKALAQKPGFVTTAYPSLRVTYLYLNKRAPMNDVHAR
KAVVDSLDYQGIVDGIAMGKAKLMNGPIPDGMWGHDPSLPLPKQDLDAAQAELGKAPKLR
ELQFLYSDKDPAWEPIGLTLQAGLSALGVNLKMEKLANATFRERLGSGDFDVAIGNWSPD
FADPYMFMNFWFDSTNAGLAGNRSFYSNPKVDQLLRDAASVSNVAQRKALYQEAQKIVVG
DAAYAYLYQKAYTVPMREAVKGYVFNPMLEQVFDFAAMSK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtcttcgcgcacctgcgtttcatcggcgtcccgaatgctcgccctggtttcc
ctgctgggcctgggtgcctggcaaccggccagcgccgccaccgcgaccgacaccctggtc
atcggcaaaccagccgatttgcagaccgtcgatccaggcgtgaccttcgacaacaacgac
tggacggtgacctaccccgcctaccagcgcctgatgcgctacaaggtggaagatggcaag
ggcagcaccgacgtcgagggcgacctggccagcggctggaccgtttcccccgataacctg
gtgtggaccttcaccctgaagcccggcaataaattcgacgacggcagcgaggtcaccgcc
gaggcggtcaagttttccatcgaacgcctgatgaagctcaagcagggcccgtccagcatc
ttcccggcggacatgacggtgacggtggtggacccgcagacagtgaaattcaccctgcag
aagcccttcgcgcccttcctcttcgccctggcccacgatggtgccagcgtgatcaacccg
aaggtggccagcgcgcatggcaaggacgtggacgcctggctggccggccataccgccggc
tccggcgcctaccgcctggccgcctggcagaagggccagtcgctgaccctggagcccaat
ccgcactacgccggcaaggcaccgaccctcaagcaggtagtgatccgcatcatcgccgag
ccttcggtacgccgcctgcaactggaacagggcgacctcgacatcatcgaggacctgccc
gaagaccaggtgaaagccctggcgcagaagcccggcttcgtcaccaccgcctacccctcg
ctgcgggtgacctacctctacctcaacaagcgcgcgcccatgaacgacgtgcacgcgcgc
aaggcggtggtcgactccctggactaccagggtatcgtcgacggtatcgccatgggtaag
gccaagctcatgaacgggcctatcccggacggcatgtgggggcatgacccgagcctgcca
ctgcccaagcaggacctggatgccgcccaggccgagctgggcaaggcgcccaagctgcgc
gagctgcaattcctctattcggacaaggacccggcctgggaacccatcggcctgaccctg
caggcgggcctcagcgcgctcggcgtcaacctgaagatggagaagctggccaacgccacc
ttccgcgaacgtctgggcagcggcgacttcgatgtggccatcggcaactggagtccggat
ttcgccgatccctacatgttcatgaacttctggttcgacagcaccaacgccggcctggcc
ggtaatcgctccttctacagcaatcccaaggtggatcagctactgcgcgacgccgccagc
gtcagcaacgtggcccaacgcaaggcgctgtatcaggaagcccagaagatcgtggtgggc
gatgccgcctacgcctacctctaccagaaggcctacacggtgccgatgcgcgaggcggtc
aaggggtacgtgttcaaccccatgctcgaacaggtcttcgatttcgctgcgatgtccaag
taa
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