KEGG   Pseudomonas oryzihabitans PRS08-11306: BJP27_22475
Entry
BJP27_22475       CDS       T05074                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ppsl  Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:ppsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppsl03400]
    BJP27_22475
Enzymes [BR:ppsl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BJP27_22475
    5.6.2.6  RNA 3'-5' helicase
     BJP27_22475
DNA repair and recombination proteins [BR:ppsl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BJP27_22475
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 AAA_25
Other DBs
NCBI-ProteinID: APQ14126
LinkDB
Position
complement(4987970..4990591)
AA seq 873 aa
MATATRTRKGPGSRWLAAQGWKDFPFQREVAKAIAAGESGLLHATTGSGKTYAVWLAALD
AFVATKPMTAKGLPSKRKQAPPPLTVLWLTPMRALAADTLRALERPVLDQELEWTLGLRT
GDTGSSERAKQNRRLPTALVTTPESLSLLLSREDAEETLGSIRLVVIDEWHELLGNKRGT
QTQLALARLRRWSPGLLTWGLSATLGNQAHALDVLLAGAPGHLVQGRQDKRLEVDTLLPE
GGVERFAWAGHLGMRLLQQVIRELEDSPTTLVFTNTRAQTELWYQALLQARPEWAGLIAL
HHGSIEKQAREWVEAGLKNGQLKAVICTSSLDLGVDFLPVERVLQIGSPKSIARLLQRAG
RSGHAPGRASRATLVPTYSLDLLDAAATRHAIAAGEIEARSAPLKPLDVLVQHLVTVALG
GGFEPDDLLPEIRSAWAYRDLSDGEWAWALAFVRNGGASLSAYPDYRRAEPDAEGIWRVP
DKQLAKRHRLGIGTIVSETSLNVQFWSKGGGGNRLGNIEEGFIARLRPGDHFLFAGRTLE
LVRVENMTVYVRRASGRKAAIPRWSGSRMPLSDTLAKHVLALLEDAEANRYESPEMRLLQ
PLLDIQRQWSALPSAHYLLAETLESREGSHLFLYPFAGRHAHLGLASLLAWRLAQRRPCT
FSIAVNDYGLELVSPVSLDWEQLLDASLFSTDDLLSDTLASLNAAELAQRRFREIARISG
LIFSGYPGAHKSNRQLQASSSLFYQVFRQYDPDNLLLGQAQNEVLRQELDADRLQQTLIR
TGALPLRLVALERPSPFALPLMVERLRESLSSEKLADRITRLVGDLEREAGPDERARAFD
PDSLVQPTHDSDLTPRRSASPRRPRVPKSGRPR
NT seq 2622 nt   +upstreamnt  +downstreamnt
atggccaccgctacacgaacgcgcaaaggccctggtagccgttggctggcggcccagggc
tggaaggactttcccttccagcgcgaggtggccaaggccatcgccgcgggcgaatccggc
ttgctccacgccaccaccggctcgggcaagacctatgcggtctggctcgccgccctggat
gccttcgtcgccaccaagccgatgaccgccaagggtctgcccagcaagcgcaagcaggcc
ccgccaccgctcaccgtattgtggctgacgcccatgcgcgccctggcggcggataccctg
cgcgccctggagcgtccggtgctcgaccaggagctggagtggaccctcggcctgcgcacc
ggcgacaccggtagcagtgagcgagccaaacagaatcgccgcctgcccaccgccctggtc
accactccggaaagcctttccttgctgctgtcccgcgaagatgccgaagaaaccctgggc
agcatccgcctggtggtgatcgatgaatggcacgaactgctcggcaacaagcgcggcacc
cagacgcaactcgccctggctcgcctgcgccgctggagtccgggactgctgacctggggc
ctgtcggcgaccctgggcaaccaggctcatgcgctcgacgtgctgctggccggcgccccc
ggccatttggtgcaaggccggcaggacaagcgcctagaggtggataccttgctgcccgag
ggtggggtcgagcgtttcgcctgggccggtcacctgggcatgcgcctgctgcagcaggtg
atccgcgagttggaagacagccccaccaccctggtcttcaccaacacccgcgcccagacc
gaactctggtaccaggcgctgctgcaggcccgccccgagtgggccggcctgatcgccctg
caccacggctccatcgagaaacaggcccgcgaatgggtcgaggccggtctcaagaatggc
cagctcaaggcggtgatctgtacctccagcctggacctcggcgtggatttcctgcccgtg
gagcgagtgctgcagatcggctcgcccaagagcatcgcgcgcctactgcaacgtgccggc
cgtagcggccacgcgcccggacgcgcctcgcgcgccaccttggtgcctacctacagcctc
gacctgctggatgccgcagccacgcgccatgccatcgccgccggcgagatcgaggcccgc
agtgcgccgctcaagccgctggatgtcctggtgcagcacctggtaaccgtggccctgggc
ggcggcttcgaaccggacgacctgttgccggagatccgcagcgcctgggcctatcgcgac
ctcagcgacggcgaatgggcctgggccctggcgttcgtccgtaacggcggcgcctccttg
tccgcctacccggattatcgccgcgccgagccggatgccgagggtatctggcgggtcccc
gacaagcagctggccaagcgccatcgcctgggcatcggtaccatcgtcagcgaaaccagc
ctcaacgtgcagttctggtccaagggcggcgggggcaatcgcctgggcaacattgaggaa
ggcttcatcgcccggctgcgccccggcgatcatttcctcttcgccggccgcaccctggag
ctggtgcgagtggaaaacatgacggtctatgtgcggcgcgccagcgggcgcaaggccgcc
atcccacgctggagcggcagccgcatgccgctgtcggacaccctcgccaagcatgtcctg
gcactgctcgaagacgccgaggccaatcgctacgagagtccggaaatgcgcctgctgcaa
ccgctgctagacatccagcggcaatggtcggcgctacccagcgctcattacctgctcgcc
gaaaccctcgaatcccgtgagggctcgcatctctttctctatcccttcgccggtcgtcat
gcccacctggggctggcgagtctgctggcctggcgcctggcgcagcggcggccctgcacc
ttttccatcgccgtcaacgactatggcctggaattggtctccccggtcagcctggactgg
gaacaactgctcgacgccagcctgttcagcaccgacgacctgctcagcgatacgctcgcc
agcctcaatgctgccgaactcgcccagcggcgctttcgcgagatcgcgcgtatttccggg
ctgatcttttccggctatcccggcgcccacaagagcaaccgtcaactgcaggccagcagc
agcctcttctaccaagtcttccgccaatacgacccggataacctgctgctcggccaggcg
cagaacgaagtcctgcgccaggagctcgatgcggaccggctacagcagacgctgatccgc
accggcgccctgcccttgcgcctggtggccctggagcgtccctcgcccttcgccctgccg
ctcatggtcgagcgcctgcgcgagagcctgagttcggagaagctggccgaccgcatcacc
cgcctggtcggtgacctggaacgcgaagccggcccggacgagcgcgcccgcgccttcgac
cccgattccctggtacagccgacccacgacagcgacctcaccccacggcgctccgctagt
ccgcggcgtcctcgcgtaccgaaatccggtcgtcctcgatga

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