Pseudomonas oryzihabitans PRS08-11306: BJP27_23015
Help
Entry
BJP27_23015 CDS
T05074
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00900
Terpenoid backbone biosynthesis
ppsl01100
Metabolic pathways
ppsl01110
Biosynthesis of secondary metabolites
Module
ppsl_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BJP27_23015
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ppsl01006
]
BJP27_23015
Enzymes [BR:
ppsl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BJP27_23015
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BJP27_23015
2.5.1.29 geranylgeranyl diphosphate synthase
BJP27_23015
Prenyltransferases [BR:
ppsl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BJP27_23015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
AceK_kinase
Motif
Other DBs
NCBI-ProteinID:
APQ14220
LinkDB
All DBs
Position
5112263..5113144
Genome browser
AA seq
293 aa
AA seq
DB search
MATVLVPNATDNFAATLQWQRTRIDERLAELLPAGDDPVAAAIRDGVLAPGKRLRPLLMI
LAAEDLGQPDESVLDLGCAVEMVHAASLFLDDMPCMDNARLRRGRPTLHVQYGEDVAMLA
AVALLSHALRLVAGLDGVPAETRTQMVCQLADAVGTAGLVCGQYHDLHGGRQARPADAIA
LTNQLKTGALFSAALGMAGATLVTTPQQREAFHVFACQLGLAFQLLDDLDDGKGLGKDAG
KDGDKSTLVSLLGREHAQRQLQSHLRQAHEALAEAGCADGALAGLLDIVFRPR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtattagtgccaaacgcgacagacaattttgccgctaccttgcagtggcag
cgtacccgtattgacgagcgcctggcagagctattaccggccggtgatgatccggtcgct
gccgccattcgcgatggcgtcctcgcgcccggcaagcggctgcgtccgctgttgatgatc
ctggccgccgaggacctggggcagcccgacgagtccgtcttggacctgggctgcgccgtg
gaaatggtgcatgcggcgtcgttgttcctcgatgacatgccctgcatggacaacgcccgc
ctgcgccgcggccgccccacgctgcatgtccagtacggcgaggacgtcgccatgctggcc
gcagtggcgctgctcagccatgccctgcgcctggtcgccgggctggacggcgtacccgcg
gagacccgcacccagatggtctgccaattggccgatgcggtcggcacggcggggctggtc
tgcggccagtatcacgacctgcacggtggtcgccaggcacgtccggccgatgccatcgcc
ctgactaaccagctcaagaccggcgcgctgttctccgctgccctgggcatggcgggtgcc
accctggtgaccaccccccagcagcgcgaggccttccacgtcttcgcttgccaactgggc
ctggccttccaactgctcgacgatctggacgacggcaagggcctgggcaaggacgccggc
aaggacggcgacaagtccaccctggtcagcctgctcggccgcgagcatgcccagcgccag
ttgcagagccatctgcggcaggcccacgaggccctggccgaggccggttgcgccgatggg
gccttggcggggttgctcgatatcgtctttcgtcctcgttga
DBGET
integrated database retrieval system
