Psychrobacillus psychrodurans: ACQCPR_00905
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Entry
ACQCPR_00905 CDS
T11278
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQCPR_00905 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsn03019
]
ACQCPR_00905 (recQ)
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_00905 (recQ)
Enzymes [BR:
ppsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACQCPR_00905 (recQ)
Messenger RNA biogenesis [BR:
ppsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACQCPR_00905 (recQ)
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACQCPR_00905 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
FIBL-2
HHH
Motif
Other DBs
NCBI-ProteinID:
XSZ05610
LinkDB
All DBs
Position
178755..180521
Genome browser
AA seq
588 aa
AA seq
DB search
MLDKARQLLQTYFGYDSFREGQETVINYVLDENSSLCVMPTGGGKSLCYQIPALMLEGTT
IVISPLISLMKDQVDTLIQAGIPATFINSTLTAEEVRETMEEVQNGQYRLLYIAPERLES
PTFLNQLKKVKVPLIAVDEAHCISQWGHDFRPSYRAIHRLKEVFKEQPTVLALTATATPA
VRDDICRLLQIQEDNTVITGFARSNLAFSVVLGQDKNKFLKEFIKKNTNEVGIIYAATRK
AVDLLYDLLNKAGIQTAKYHAGLPEAFRNKEQERFLTDEAQVMVATNAFGMGIDKSNVRY
VIHYQLPKNMESYYQEAGRAGRDGLPSECIVLYASQDVQTQRFLIDQALDRERIPQELEK
LQGMVDYCHTENCLQQFVVTYFGEQNATKCGRCGNCTDSREVQNVTKEVQMVLSCVVRMG
QRFGKTITAQVLTGSQNKKVVDFGFTKLSTYGILKGKSLKEVSGLMEFMIAEGLLSVDHG
SLPTIYVSDAGKEVLLGNRLVERKGVAVTKQIANNDPLFEKLRILRKKIADEAGVPPFVI
FSDKTLQHMCAERPQTEEQLLEIHGIGENKREKYGQAFLEEIHNYITV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgttagataaagcacgtcaattattacaaacttattttggatatgattcttttcgagag
ggtcaagaaactgttataaactatgtattagatgagaactctagtttatgtgttatgccg
actgggggagggaagtctctttgttaccaaatcccggcgttgatgttagaaggcactacg
attgttatctctccattgatttcccttatgaaagaccaggtagatactctaattcaagct
ggtattcctgcaaccttcataaacagtacgctaactgcagaagaagtaagagaaacgatg
gaagaagtacaaaatggtcaatatcgtttactttatatagccccagagcgtttagaatcg
cctacttttttaaatcaattaaaaaaagttaaggtcccattaatagcagtggacgaggca
cattgtatttcacaatggggccatgatttccggccaagttatcgtgctattcatcgatta
aaggaagtatttaaagagcaaccaacggtacttgccctaactgcaaccgcaactccagct
gtgcgtgatgatatatgtcgattactacaaatccaagaggataatacagttattactggg
tttgcaagatcaaacctggcattttcagtcgtattaggacaggataaaaataagttttta
aaagaatttattaaaaaaaatacgaacgaagttggaattatttacgcagcaacaagaaaa
gctgtagaccttttatatgatttgctaaataaggcgggtatccagactgctaaatatcat
gcaggtcttccagaagcatttcgaaacaaagaacaagaacgttttctaacagatgaagca
caagtaatggttgcaaccaatgcatttggtatggggatcgataaatccaatgtccgttat
gtgattcactatcaattgccgaaaaatatggaaagctactatcaggaagctggaagagca
ggtcgagatggactaccaagtgaatgtatcgttttgtatgcatcacaagacgttcaaacg
cagcgatttttaatagaccaagcattggatcgtgaacggattcctcaggaattagaaaaa
ctacagggcatggtagattattgccataccgaaaattgcctgcagcagtttgttgttact
tattttggagagcaaaatgctacaaaatgtggtcgttgtggaaactgtacagattcaaga
gaagtccaaaacgtaacaaaggaagtacaaatggttctttcatgtgttgttcgaatggga
caaagatttggcaagacaattactgcgcaagtattgactggttctcaaaacaaaaaagtg
gtcgattttggttttacgaaattatcaacatatggcatattaaagggtaaatcattaaaa
gaagtgtcagggttaatggagtttatgattgcggaaggattactttcggtggatcatgga
agcttaccaaccatttatgtatcagatgcaggaaaagaagtactactggggaatagatta
gtggagcgcaaaggcgtagctgtaacaaagcaaattgctaataatgatccattgtttgaa
aaactaaggatacttcggaaaaaaattgcggacgaagcaggtgtaccaccatttgttatt
ttttcagataagactctacagcatatgtgtgcagagcgtccgcaaaccgaagaacaattg
ttagaaattcacggaataggcgaaaataaacgagaaaaatatggacaagcttttctcgag
gaaattcacaattatattaccgtgtag
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