Psychrobacillus psychrodurans: ACQCPR_00920
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Entry
ACQCPR_00920 CDS
T11278
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQCPR_00920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsn03019
]
ACQCPR_00920
03009 Ribosome biogenesis [BR:
ppsn03009
]
ACQCPR_00920
Enzymes [BR:
ppsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACQCPR_00920
Messenger RNA biogenesis [BR:
ppsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACQCPR_00920
Ribosome biogenesis [BR:
ppsn03009
]
Prokaryotic type
rRNA helicases
ACQCPR_00920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrD-helicase
AAA_22
WSD
Motif
Other DBs
NCBI-ProteinID:
XSZ07244
LinkDB
All DBs
Position
181243..182682
Genome browser
AA seq
479 aa
AA seq
DB search
MVHFKEFKLEEKILRAIEQLGYTEPTEVQQKVIPVVLEKQDVLVKSKTGSGKTASFATPL
CELVDWEENKPQALVLTPTRELAVQVQEDITNIGRYKRIKGLALYGKSPFARQKLALKQK
THIIVGTPGRVLDHIEKGTLDVSKIEYLVIDEADEMLNMGFLEQVESIIKLLPKTRTTML
FSATLSEQIKKLSSKYMKQAVSIEIDASEENAPNIEHVKYVVVEELKLSLLEKLTIVENP
DSCIIFCRTKERVEQLVDVLDEKGYTADKIHGGMMQEDRFEVMDDFRKGEFRYLIATDVA
ARGIDIDDITHVIHYDVPLEQESYVHRTGRTGRAGRSGKSIMLATPFEDKFVREIETFIG
FEITAESEPTKEDVVKSRASFDEKMQEQPEVKKSKGEQLNMNITKLYFNGGKKKKIRAVD
FVGTIAKIEGVSADDIGIITIQDTVSYVEILNGKGPLVLKKMRNTTVKGKLLKVHIANK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atagtgcattttaaagagtttaagttagaagagaagattttgcgtgccatagaacaatta
ggttatacagagccgacagaagtgcaacaaaaagtaatacctgttgttttagaaaaacag
gatgttttagtaaaatctaaaacaggcagtgggaaaacagcttcttttgctacaccatta
tgtgagcttgtagattgggaagaaaacaaaccacaggcgctagtattaacgcctacacga
gaattggcagttcaagttcaagaggatattacaaatatcggacgctacaaacgtataaaa
ggacttgccttatacgggaaatcacctttcgctagacaaaagttagctctaaagcaaaag
acgcatatcattgtaggaacgcccggtagagtattagaccatatagaaaaagggacacta
gatgtatctaaaatagagtatcttgttattgatgaagcagatgagatgctaaatatgggc
tttttagaacaagtggagtctattattaaattacttccgaaaacgcgtacgaccatgtta
ttttcggcaactctttccgaacaaataaaaaaattaagcagtaagtatatgaaacaagca
gtatccattgaaattgatgcatctgaagaaaatgctccaaatatagagcatgtgaagtat
gttgtagtagaggagctaaagctttcgttacttgaaaagctaacaattgtcgagaacccg
gacagttgtattatcttctgtcgtaccaaggagcgcgtagagcagcttgtggatgtatta
gatgaaaaaggttatactgcggacaaaatacatggtggcatgatgcaggaagatcgcttc
gaggtgatggatgatttccgtaaaggagagtttcgttacttaattgcgactgatgttgca
gctcgtgggattgatattgatgatattacacatgttattcattatgatgtaccattggag
caagaaagctatgtacatcgtacaggtagaacagggcgagctgggcgaagtggtaaatcg
attatgctggcaactccatttgaggataagtttgtaagagaaattgagacatttattggt
tttgaaattactgcagaatcagagcctactaaagaagatgttgtaaaaagccgtgcttca
ttcgatgagaaaatgcaggagcaacccgaggttaaaaaatctaagggtgagcaactaaat
atgaatataacaaaactgtatttcaatggtggaaagaaaaagaaaatccgggcggtagat
tttgttggaactattgctaaaatcgaaggagtctccgcagatgatataggaattatcact
attcaagacaccgtatcttatgttgagatattaaatggcaaaggtccacttgtattgaaa
aagatgagaaatacaacagtcaaaggtaaactgctgaaagttcatatcgccaataaataa
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