Psychrobacillus psychrodurans: ACQCPR_02630
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Entry
ACQCPR_02630 CDS
T11278
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03030
DNA replication
ppsn03430
Mismatch repair
ppsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQCPR_02630
03430 Mismatch repair
ACQCPR_02630
03440 Homologous recombination
ACQCPR_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsn03032
]
ACQCPR_02630
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_02630
Enzymes [BR:
ppsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQCPR_02630
DNA replication proteins [BR:
ppsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQCPR_02630
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQCPR_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
RNase_H_2
PTCB-BRCT
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XSZ05930
LinkDB
All DBs
Position
528742..529662
Genome browser
AA seq
306 aa
AA seq
DB search
MDFIAIDFETANSLRSSVCSVGIVQVKNGEIYKEIHSLINPLSEFHYYNTKIHGITEYMV
HGAPTFEEFWPDMKNLIKDQVVVAHNASFDMGVLQESLRQFHEPSPNFEYGCSYRIAKKV
WPQLYNHKLSTVANYLGISLRHHDALEDARAAAIITIEAMQKTKTNTVQQLAKLHNVKIN
PSIQTKKQPSSQRNGKADLTIEYLKPESTELNSKHPFYGAQIVFTGRMLAMTRSKAAQLA
VNCGAVCKGTVDHQTNYLVVGDNDLAKYLQGIKSSKMQKVEGMIQQGLPIEIVGEQDFLR
LVRYPF
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggactttatagctatcgattttgaaacagctaatagcctgcgttcaagtgtttgttca
gtaggaatcgtacaagttaagaacggggaaatatataaagaaatacattccttaataaat
cctttaagtgaatttcattattataatacaaaaattcatggaattaccgaatatatggta
catggtgcaccaaccttcgaagaattctggccagatatgaaaaatctaattaaagatcaa
gttgtcgttgcacataatgctagttttgatatgggtgtattacaggaatccttacgtcaa
tttcatgaaccctcaccaaattttgagtatgggtgctcttatcgaattgccaaaaaagtt
tggccacaactttacaatcataagttatcaacggtagcgaattatttaggtattagctta
agacatcatgatgctttagaggatgcccgtgcagctgctattattacgatagaagcgatg
cagaaaaccaaaacaaatacagtccaacaactggcaaaactacataatgtaaaaataaat
ccctcgattcaaactaagaaacaaccatcttctcaacgtaatggtaaagcagatttgact
attgaatatttaaaacctgaaagtacagagctaaattccaaacatccgttttatggagcc
caaattgttttcacgggaagaatgcttgcgatgactagatcgaaagcagcgcaacttgca
gtgaattgtggggcggtttgcaagggaacagtggatcatcaaacaaattacttagtcgta
ggggataatgatttagccaagtacctacaaggcatcaaaagctctaaaatgcaaaaggta
gaaggcatgattcaacaaggacttccaattgaaatcgttggagagcaagattttttaagg
ttagttcgatatccattttga
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