Psychrobacillus psychrodurans: ACQCPR_03940
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Entry
ACQCPR_03940 CDS
T11278
Name
(GenBank) endonuclease
Organism
ppsn Psychrobacillus psychrodurans
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Gene cluster
GFIT
Motif
Pfam:
Endonuclease_1
CHB_HEX_C_1
Fn3_assoc
LTD
Exo_endo_phos_3
DUF5689
Exo_endo_phos
CHB_HEX_C
Motif
Other DBs
NCBI-ProteinID:
XSZ06183
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Position
814987..819708
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AA seq
1573 aa
AA seq
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MRKRNLKKSINAFLSASLVASLVFPALPSKAVAVSNTSDLIISEYIEGSSFNKAIEIYNG
TGAAVDLSVYSLELHTNGAAATANKVSLTGTLANNDTYVLYHNDANTDIQSKGNHANNSV
INFNGNDPVVLKKSGTIIDSIGQVGSSADYGKDVTLVRNSNIVAGDTIIDDAFNPAEWTT
LPKDDSSNLGSHTMVIGDPDPGETQVEAVTVSIPSSAVPADTEITLSTNTEGAFIYYTTD
GSDPTSSSTKYENPIVIDKDITIKAIAVKEGLKDSAIAEFTYTVLNESGAISIAEARTTA
IGQTVTIKGIVAANLKNSISVQDAANGIAIRPSSLPAAVGDEVTLTGKLAEFRGLLQLDG
TTIVSKTENVGAPTPKFVTGAEVNENNESLLVQAKQITLKAVNTDKTNYTATDGITEFIV
RDENKSLGLAIGDTYESITGIVQQFDNAYQIIPRSVQDIVEDSSILQPVTATPGSGTFNG
STFITLSTTTANAEIHYTLNGSEPTKDSAKYSTPIEIKENTTLKAVAITPVGTSEMKTFE
YKITDSLQIHDIQGAGHHTSFDNKTVEGIQGVVTYSFLLNGATYYHIQTPDELADTNPNT
SEAIVLYSGTNTWPIKVGDLVSVTGKVSEFAYDGYADRQTTDLKTTQINVRNDQGGKVEV
ITSGVALPAPILIDETKMSLAKIDSDNLAVFNPTVDAIDFWESIEGMRVQVGNVKAVAPQ
EHGDLITVLESAPTNSLHGGVLYEKDNQNPNRVQFRLEPNGPGRDFEVATGDKFKGPITG
VVGYSFQNFKIYVSLNEMKAAHTKGNAKPEKTTIVNAEDKLTIASYNLENFSNNKTSTTD
DKARKLARAIANDMQSPDIVGVTEVQDNNGESSGDSKADQSYERLIAAIKTAGGANYKYV
NIDPVNNQDGGAPNANIRVGFLYNPERVKLTEGISGGNATNAVGYKDGKLTLNPGRIDPT
NSAFNSSRKPLAAQFDFKGESVIVIANHWNSKSGDTPLFGSIQPPKYDSEVQRKNIAKIV
SDFVIDIKTKNPDANVVSLGDFNDYQFADALLIHEGEHMTNMINKVETSDRYTYLYQGNS
QVLDHILVTKNLENKTKIDILHINADFTDMAGRASDHDPVMVQIDIFADDAVTPITAEKT
YNINNLQTKKLTIGKPSVSITIDDSSEITEGILFTSDYAEFHGDGFAEQTVTIKPLNAGA
MMDFKGTNVQKVIIDGTNVKEIRGAENIQEFEFINGADSKNIKFTNSKGEPIVVPSLPGE
NQAPVVKNNIPSQTIKPGESISILLTDHFADPENQVLTFSSTLGTIAGSMLTLTLAEGSH
IVGVTATDGEKSVTTRFSVLVTSASSPIDVYYKDAIGKEGQALKTALYEIIDDHTQLSYD
QVWAALRETDEDPNNTNNVILFYSGVPRSKTANGGNVGQWNREHTWAKSHGDFGTSKGPG
TDIHHLRPTDVQVNSSRGNLDFDNGGSPVNNCDECKRASNSFEPPNRVKGDVARILFYMA
TRYEQGDKVDLELNEKLGNGSAPYHGKLSTLLKWHEQDPVDEFERNRNNVIQKWQGNRNP
FIDHPEWVNLIWK
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaaggaatttgaaaaaatccataaatgctttcttatctgccagtttagtagct
agtttagtattccctgcattaccatcgaaagcagtagccgtatcaaatacatctgatttg
ataatttcagagtatattgaaggtagcagctttaataaggccattgaaatttacaatgga
actggagcagcagttgatttaagtgtttattcacttgaacttcatacaaatggagcagct
gcgacagctaataaagtctcattaacaggtacattagctaataatgatacgtatgtttta
tatcataatgatgcaaatacagatattcaaagtaagggaaaccatgcaaacaattctgtt
attaatttcaatggaaatgaccctgtcgttttaaagaagtcaggtacaatcattgattcc
attgggcaagttggttcatctgcagactatggtaaagatgtaacgcttgtccgaaatagt
aatattgttgctggagacacaattatcgatgacgcttttaatccagcagaatggacgaca
ctgccaaaagacgattcctccaatttaggctcccacacaatggtcattggggaccctgat
cccggagaaacccaagtagaagctgtaacggtttcaataccatcatcggctgttccagca
gacacagaaattacattatcgactaacacggaaggagctttcatttactatacgacagat
ggatctgatccaactagctcaagtacgaaatatgaaaatccgattgttatcgacaaagat
attacgataaaagcaatcgccgtgaaagaagggttaaaggatagtgctatcgctgaattc
acgtatacagttttaaatgagtctggcgcaatttctattgcagaagcacgaactacagct
attggtcaaacggttactattaaagggatagtagctgcaaacttaaaaaattcaatttca
gttcaagatgctgcaaatggtattgcaatacgtccttcaagtttgcctgcggcagtagga
gatgaagtaacacttactgggaaattagcggaattccgtggacttcttcaattagacggt
acgacgatagttagcaagactgaaaatgtgggagcaccaacccctaagtttgtaacagga
gcagaagtgaatgaaaacaatgaatcccttcttgtccaagcaaaacaaattacattaaag
gcagtaaatactgataagactaactatactgctacagatggcataactgagtttattgta
cgcgacgaaaataaatcattaggattggctattggagatacgtatgaatccattacggga
attgtgcaacagtttgataacgcatatcaaattatccctcgctcagttcaagatattgta
gaggacagttccattctacagcccgttactgcaactcctggtagtggaacattcaatgga
tctacttttataaccttgtctacaacgacggcgaatgcggaaatccattacacattaaac
ggttcagagccgacaaaggatagcgcaaaatattcaacaccaatcgagattaaagaaaac
actacacttaaagcagtagcaattactccagtaggtacttcggaaatgaagacattcgag
tataaaattacggatagtcttcaaattcatgatatccaaggagcgggacaccacacttct
tttgacaataaaacagtagaaggcattcaaggagttgttacttactcgttcttgttaaat
ggagcaacctactatcatatacaaacaccggatgagctagcggatacgaatccaaatact
tctgaagccattgtactttacagcggaacaaacacatggccaattaaagtaggggatttg
gtatcagttactgggaaagtaagtgaatttgcatatgacggatatgctgatcgtcaaaca
acagacttaaaaacaacgcaaattaatgttagaaatgaccagggtggaaaagtggaagtt
attacaagtggcgtagctttaccagctccaatcttaatcgatgaaacgaaaatgtctcta
gcaaaaattgatagcgacaatcttgcagttttcaatccaaccgtagatgcaatcgatttc
tgggaaagtatcgaaggaatgcgcgtgcaagttggaaatgtgaaagcagtagctcctcaa
gagcatggtgatttgataactgttttggaaagcgctccaacgaactccctgcatggtggg
gttttatatgaaaaggacaatcaaaatccaaaccgcgtgcaattccgcttagaaccaaat
ggacctggacgggatttcgaagtagcaactggggataagtttaaagggccgattactgga
gtagtgggttattcgtttcaaaactttaaaatttatgtctctttaaatgaaatgaaagct
gcccatacaaaaggaaatgcaaaaccagaaaaaacaacaattgtgaacgcagaagataag
ttaacaattgcatcatataacttagaaaacttctcgaataataaaacatcgactacagac
gacaaagcacgtaaattagcaagagcaattgcaaacgatatgcagagtcctgatattgtt
ggtgtaactgaagtacaagacaataacggagaaagctctggagattcaaaggcagatcaa
agctatgaaagacttattgctgcaattaaaactgctggtggagcaaactacaaatatgta
aatattgacccagtgaacaaccaagacggcggagcaccaaatgcaaatattcgtgttgga
ttcctatataatccagaacgagtaaagttgacagaaggtatttctggtggaaatgcaact
aatgctgttggttacaaagatggcaagctaacacttaacccaggtcgtattgatccaaca
aatagcgcatttaatagtagccgtaaacctttagcggcacaatttgactttaaaggtgaa
agtgtcatcgttattgcgaatcattggaactctaaaagtggtgatacaccattgttcgga
tccattcaaccaccaaaatatgacagtgaagtacaacgtaaaaacattgcaaaaatcgtt
tctgactttgttatagatattaaaacgaaaaacccagatgcaaatgttgtttctttgggt
gactttaacgattatcaatttgctgatgcacttttaattcatgaaggtgaacacatgacg
aatatgattaataaggtggaaacgtcagatcgatacacatacctatatcaagggaactca
caagtattagatcatattttagtcacaaagaacttagaaaataaaacgaaaatcgatatt
cttcatatcaatgcagactttaccgatatggcaggacgtgcaagtgaccatgatccagta
atggtacaaattgatatatttgcagatgatgctgttacaccgattacagctgaaaaaaca
tacaatatcaataatcttcaaacaaagaaacttactattggtaaacctagcgtatctatc
acaattgacgattcatcagaaatcacagaaggcattctttttacgagtgattatgcagaa
ttccatggagacggttttgcagagcaaactgtaacgattaaaccactaaacgctggcgcg
atgatggatttcaaaggtacgaatgtccaaaaagtaatcattgatggtacgaacgtaaaa
gaaattagaggcgctgagaatattcaagaatttgaattcattaatggtgcagatagcaaa
aatattaaattcacaaattcgaaaggggaacccattgtggttccttctttacctggtgaa
aatcaagcgccagtggtaaagaataatattccaagtcaaacaattaaacctggtgagtct
atttcaattttattaacagatcatttcgcagatccagaaaaccaagtactaactttttct
tctacgttaggaacgatagcagggtctatgttaacactaacacttgcagaaggaagccat
attgtaggagttaccgctacagacggcgaaaaaagtgtaacgacaagatttagtgtactt
gtaacttccgctagctcacctattgatgtctattataaagatgctattggtaaagaaggt
caagctttaaaaactgcactatatgaaataattgacgaccatacacagctttcttatgac
caagtatgggcagcattacgagaaacggatgaggatccgaataatacaaacaatgtcata
ttgttttactctggagtaccacgttctaaaactgccaatggtggaaacgtaggacagtgg
aatagagaacacacatgggcaaaatcacatggagacttcggcacaagtaaaggaccagga
accgatatccatcatcttagacctacagacgtacaagtgaatagttcaagaggaaactta
gattttgataacggtggcagcccggtaaataattgtgacgaatgtaaacgagcttctaac
tcgtttgagccaccaaatcgtgtcaaaggtgatgtagcacgaatccttttttacatggcg
acacgctatgaacaaggcgacaaagtagacttagaactaaacgaaaagctcggcaatgga
agtgcgccataccacggaaagctttcgaccctactaaaatggcatgagcaagacccagtt
gatgaatttgaacgtaatcgcaacaatgtcattcaaaaatggcaaggaaaccgcaatccg
ttcattgatcatccagaatgggtaaacctgatttggaaataa
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integrated database retrieval system
