Psychrobacillus psychrodurans: ACQCPR_04270
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Entry
ACQCPR_04270 CDS
T11278
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20391
HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACQCPR_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsn03000
]
ACQCPR_04270
Transcription factors [BR:
ppsn03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACQCPR_04270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNPP_C
HTH_3
HTH_19
HTH_31
TPR_2
HTH_26
TPR_1
ARM_TT21_5th
HTH_92
Motif
Other DBs
NCBI-ProteinID:
XSZ07267
LinkDB
All DBs
Position
912227..913102
Genome browser
AA seq
291 aa
AA seq
DB search
MKYLGLEISKLRAELGISQKELAKDICTQSTISRIEAGDVYPAIDTLLKIALKLQVPVEY
FIEMLFHKNVLESEGLINEIEYHLKEHNYKRVISIINSNEIDNDNIWLNLYLDYILSTAK
YYLKMISPEKCIDNLKGILNYSNPTTIQFRFLQIKVNNTIANVYGEKGESQKCLYHFNKI
LKEHIHKNYSDYKINRTLITVLFNKCKTLYDIKDYDAALEAANQGIQKSKESSFMFLNGQ
FLYYKGQCLEKKAAPIAEIKEVYQQALFFFEFQELPFYIQAINQNKKQFLQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttgggcttagaaataagtaaacttagagcagaattgggaatatcccaaaag
gagctcgcaaaagatatttgtacacaatcgacgattagtcgaattgaagctggggatgta
tatccagcaatagatactttattgaagatagctttaaaactccaagtcccagtagagtat
tttattgaaatgctgtttcataaaaatgttctagaaagtgagggattaataaatgagatt
gagtaccacttaaaagaacataactataaaagagtaatttcaataattaatagtaatgag
atagataacgacaacatttggttaaacttatacctcgactatattttaagtaccgcaaaa
tattatttgaaaatgatttcaccagaaaaatgtatagataacttaaaaggtattttaaat
tattcaaatccaactacaatacaatttagatttttgcaaattaaagttaataatactatc
gccaatgtttatggtgaaaaaggtgaaagtcaaaaatgtctatatcattttaataaaata
ttaaaagagcatattcataaaaactatagtgactataaaataaatagaactctaataact
gttttatttaataaatgtaaaaccttatatgacattaaagactatgatgctgcacttgaa
gctgcaaaccaaggaattcaaaaatctaaggaaagctcttttatgttcttaaatggtcag
ttcttgtattacaaaggccaatgcttagaaaagaaagctgctcctatagctgaaatcaaa
gaagtgtatcaacaagctctgtttttcttcgaatttcaagaattacctttttatattcaa
gcgattaatcaaaataaaaaacaatttttacagtag
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