Psychrobacillus psychrodurans: ACQCPR_05065
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Entry
ACQCPR_05065 CDS
T11278
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ppsn Psychrobacillus psychrodurans
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_05065 (addB)
Enzymes [BR:
ppsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACQCPR_05065 (addB)
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACQCPR_05065 (addB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XSZ06400
LinkDB
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Position
1097296..1100790
Genome browser
AA seq
1164 aa
AA seq
DB search
MSLRIVSGRSGYGKTTFIHQEIITELQRAPIGDPIFYIVPDQMSFSSEYDLAAESGLPGL
IRAQVTTFKRLAWRVLQETGGIAKEEISGFGYRMLIRSLLENHKDEFTLFKRAATKRGFT
DQIEVLLKEFSRYCMDYSTMANALNNLENVNAPKTLIDKSSDIMLMLEKMEQKLGVSYID
GEGYLTLLATKIKDSTLLAKTDIYIDGFTSFTTRELEIIAELMKQVKRITIALPMESLQD
AVDEQSLFYQPANTCARLLEIAQTEQVEIEEAVHLHEQKRFMSKEIAHIEANLDQLPPLQ
TNSEGNIRITEAANRRAEMHAVARQIRELMQQKSVRYNEMAILHRDADTYEGLIETIFPQ
YDIPVFISKKKPMLHHPLIELSRTILEIIRTDWKYEPVFRAVKTDLFFPLDAPKKTWRER
ADRLENFVLAFGIYGDRWWDERRWVYKKYRGLEFYSKVQTDEEKSIQADIHTIRDLIVEP
IKALSDQLKQSKTGKDYAIAIYTFIEALNVYEKLQSLKQTEEENGQLLLASEHEQVWNEW
VNVVDQFVLMFGEKEMSLEEVAKILDEGYDQLDFSSIPPTIDQVIVGNVDIIRLTNIKAA
FVLGVNDGAYPKRMDHEGILTDTEREWFMQIGFELAPTSKVRLMDENYLIYKAFVTASHF
LYVSYPMADNEGKALLPSMYIKKLHQMVSDLPVEVAVVDPSDMLTDKLDLTSISHPRPTL
PYVITQLRSALETGELPEVWQSVYQYYLMDPYWSKLVKRITKPLIHGNKTEKLNEEMTEA
LYGETIISSVSRVEKYYSCPFAHYASYGLKLEERAEYRLEAPQMGDLFHAALKWIADETK
RVDLQWSQLTRPQCYQLARQAVDYIVPVFVHQLLLSTNRYRYIQRKLEQIVANTLIALSQ
HSKGSSFVPIAIEAGFGPGEALPALEIPLKRNRKMQLRGRIDRVDAANINGNMFVRIVDY
KSSKKGIDLNEVYHGISLQMLTYLDVAVENADIWLHEDADPAGVLYVHMHNPFIQSQKEM
EDAELEDAIYKSYKMNGLLLDDPEVIMEMDEQISGFSKVIPVRMNKDGNLSKSSSKVVEP
EQMRLLQSFVRKKHEQAGNGMNAGDTRVLPYRIKDKMPCNYCSYRSVCQFDPGDPAQQVR
VLKVEQPEIVAEKIREEMGSNEHS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgctacgaatagttagtggccgatcaggctatggaaaaacaacctttatccaccaa
gaaataatcacagaactacaaagagctcctataggagacccaatattctacatagttccc
gaccaaatgtcattttccagtgagtatgaccttgcagcagaatcgggacttccaggacta
attcgagcacaggtaactacatttaaacgattagcgtggcgtgttcttcaagaaacaggt
ggaattgccaaagaagaaataagtggctttggttatcgtatgcttattcggagtctgctt
gaaaatcacaaagacgaatttacgctatttaagcgagcagcaacaaaaagaggattcacc
gatcaaatcgaagtattacttaaagagtttagtagatactgcatggattactctaccatg
gcaaatgccctaaacaatctagaaaatgttaacgccccaaaaacgcttatagataaatcc
tccgatataatgctaatgcttgaaaagatggagcaaaaactaggagttagctatattgac
ggggaaggttacttaacattattagcaaccaaaataaaagactctacactccttgcaaaa
acagatatatacatcgatggtttcacttcatttacaacaagagaattagagattatcgcg
gaattaatgaaacaggtaaagcgtattacaattgctctaccaatggaatcattgcaggat
gctgtagatgaacaatcgctattctatcaaccagcaaatacatgtgctaggttattagaa
atagcacaaaccgaacaagttgaaatcgaagaagcagtgcatctgcatgaacagaaacgc
tttatgtcaaaagaaattgctcatattgaggcaaatctggatcagcttcctcccttgcaa
acaaattcagaagggaatattcgaataacagaagctgccaatcgtcgtgcggaaatgcat
gcagtagcaaggcaaatacgagaattgatgcaacaaaaaagtgttcgttataacgaaatg
gctattttgcatagagatgcagatacgtatgaagggttgatcgagactattttcccacag
tacgatattccagttttcattagtaaaaagaaaccgatgttacatcatccactaatcgaa
cttagccggaccattttagaaattattcgaacagactggaagtatgaaccagtgtttcgc
gcagtgaagactgatttgttttttccgttagatgcccctaaaaaaacgtggagagagcgt
gcggatcgtttagaaaattttgtactggcattcggaatctatggagatagatggtgggat
gaaagacgttgggtttataaaaaatatcgtggtttagaattttattccaaagtgcaaacc
gatgaagaaaaaagtattcaagcagatatccatacaataagagatttgatcgttgaacca
atcaaagctctgtccgatcagttgaaacaaagtaaaacaggaaaagattatgcaatagct
atctatacatttatagaagcactaaacgtatatgaaaaactgcaaagcttgaagcaaact
gaagaggaaaacggccaattactcctcgcttccgaacatgagcaagtatggaatgagtgg
gtaaatgtagtcgaccaatttgtattgatgtttggcgagaaggaaatgtccttggaagaa
gtagccaaaattttagatgagggttatgatcagcttgatttttctagcattccacctact
attgatcaagtgattgttggtaatgttgatatcattcgtctaacgaatataaaagcggca
tttgtactaggagttaatgatggagcttatccaaagcggatggatcatgaagggatacta
actgatacagagcgtgaatggttcatgcaaattggatttgaacttgcaccaacgtcgaaa
gtgcgcttgatggatgaaaattatttaatctataaagcatttgtaacagcttcacatttc
ttatacgtatcttatccaatggcagacaacgaagggaaagcactattaccttccatgtat
attaaaaagctacatcaaatggtaagtgatttgcctgttgaagtagctgtagtcgatccg
agcgatatgctaacagataaattagatctgacttctattagtcacccacgtcctacttta
ccttatgttattacgcagcttcgaagtgctctagaaacaggggaattacccgaagtgtgg
cagtcggtttatcagtattatttaatggatccttattggtcgaaactagtaaaaagaatt
acaaagcccttaatacatggcaataaaacagagaaattaaatgaagagatgactgaagcc
ctatatggggaaacgattatttccagtgtatctcgtgtagaaaaatattatagctgcccg
tttgcacactacgcatcttatggcctgaagctagaagaacgtgcagaatatagattagaa
gcaccacaaatgggagacttattccatgcggcgttaaaatggattgcggatgaaacaaag
cgtgtagatttacagtggtctcagttaactcgaccacaatgctaccaacttgctagacaa
gcagtcgattatattgtgccagtctttgtacaccaattattattaagtacaaatcgatat
cgatatattcaacgaaaattggagcaaatcgttgccaatacattgattgccttaagccaa
cattctaaagggtccagctttgttccaattgctatagaagctggtttcggtcctggtgag
gcgctccctgctttggaaattccactgaagcgtaatcgtaaaatgcaattgcgtggtcga
atcgaccgagtggatgcagctaatattaacggcaatatgtttgtacggattgtcgattat
aaatcatctaaaaaagggattgatttgaacgaggtttatcatggtatttctcttcaaatg
ttaacttatttagatgttgctgttgaaaatgcggatatatggctacatgaggatgctgat
ccagcaggagtcttatatgtgcatatgcataatccatttattcagtcccaaaaagaaatg
gaagatgcagaattagaggatgcgatttataaatcatacaaaatgaatggtctactactt
gatgatccagaagtaattatggaaatggacgagcagatttcaggattttcgaaagtgatt
ccagtacgtatgaacaaagacggaaacttgtcgaaatcatcttccaaggtagttgagcca
gagcaaatgagattgctacagtcctttgttcgtaaaaagcatgagcaagcagggaatggc
atgaatgccggggatactcgcgttctaccttatcgaataaaagataaaatgccttgtaac
tattgctcttatcgtagtgtttgccaattcgatcccggggatccagctcaacaagtacgt
gtattgaaagtggagcaaccagaaatagtagcagaaaaaatacgagaggagatgggttca
aatgaacattcctaa
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