Psychrobacillus psychrodurans: ACQCPR_06415
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Entry
ACQCPR_06415 CDS
T11278
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppsn Psychrobacillus psychrodurans
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsn03032
]
ACQCPR_06415 (topA)
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_06415 (topA)
Enzymes [BR:
ppsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACQCPR_06415 (topA)
DNA replication proteins [BR:
ppsn03032
]
Prokaryotic type
DNA Topoisomerases
ACQCPR_06415 (topA)
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACQCPR_06415 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XSZ06658
LinkDB
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Position
1380248..1382323
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIEKYLGKKYKVKASIGHVRDLPRSQMGVDTENNYEPKYITIRGK
GPVLQELKTAAKKAKKIYLAADPDREGEAIAWHLANSLNVDIESDCRVVFNEITKDAILE
SFKHPRPINMDLVDSQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIEREN
EINNFIPEEYWTIEGQFDKNKKAFDALYYGSEKEKRKLSKEEEVKEVLKLMKGKKFEVAN
VVKKERKRNPASSFTTSSLQQEAARKLNFRARKTMMLAQQLYEGIDLGKKQGTVGLITYM
RTDSTRISDSAKADAQEYIKNEFGSEYISTKKVEKQSKKAQDAHEAVRPTSVLRTPNELK
AILSRDQLKLYKLIWERFIASQMASAILDTVAVDLKNGEVYFRANGSQVKFPGFMKVYVE
GSDDQTDDKDKLLPVLEVGDKVNALSIEPKQHFTQPPPRYSEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALETKRFVPTELGTIVHQLVLEFFPEILDIEFTAQMERDLDSVEEGQ
VKWVEVIDGFYQDFEKRVVYADAEMEKIVIKDEPTGEDCENCGSPMVYKLGRYGKFMACS
NFPDCRNTKAIIKEIGVPCRACGEGQIVERKSKTKRLFYGCDQYPTCEFVSWDKPISRPC
PKCNEMLVEKKLKKGIQIQCVACDYKEDPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattatttggtaattgttgaatcgccagcaaaggcaaaaacaatagaaaaatat
cttggaaaaaaatataaagtgaaagcatcgattggtcacgtacgtgatttacctagaagt
caaatgggtgtcgatactgaaaataattacgaaccaaagtatattacgataaggggtaaa
ggcccggtactacaggaattgaaaacagcagcaaaaaaagcgaagaaaatttatctcgcg
gctgaccccgacagagaaggggaagctattgcgtggcacttggcaaattctttaaatgta
gatatagaatcggattgccgagttgtatttaatgaaattacaaaagatgctattcttgaa
tcgtttaaacaccctagaccaataaatatggatttagtagattctcagcaagcacgaaga
atcttagaccgacttgtaggttataatataagtccaattttatggaaaaaagtaaaaaaa
ggactttcagcaggacgtgtgcaatctgtagctcttcgtttaatcattgaacgagaaaat
gaaattaataatttcataccagaagagtattggacgatcgaaggacagttcgataagaat
aagaaagctttcgatgcactttattatggaagtgagaaagaaaaaaggaagctatctaaa
gaagaagaagtaaaagaagtactgaagttaatgaagggcaaaaagttcgaagttgcaaat
gtagtaaaaaaagaacgcaaacgtaatccagcttcatcctttacgacatcatcgcttcaa
caggaagctgcaagaaaactaaattttagagctagaaaaacaatgatgctagcacagcaa
ttgtatgagggtatcgatctagggaaaaaacaaggaacggtcgggttaataacctatatg
cgtacagattcaacaagaatttcggatagtgcaaaagctgacgcacaggaatatatcaaa
aatgaatttggttctgaatacatttctacgaagaaagtagaaaagcaatcgaaaaaagca
caggatgcacatgaagctgttcgacctacaagtgtcctaagaactcctaatgaactaaaa
gcgatcctttctcgtgatcaactaaaactatacaagttaatatgggagcgttttatagct
agccaaatggcatcggctatattagatacagtggctgttgatctaaaaaatggagaagtt
tactttagagcaaatggatcacaagttaaatttcctggatttatgaaggtgtatgtagaa
ggttcagatgatcaaacggacgataaggacaaattattaccggttctagaagtcggagat
aaggttaatgctttgtccattgagccaaagcagcactttactcaacctcctccaagatac
tcggaggcaagactggtgaaaacattggaagagttaggaataggtagaccttctacttat
gctccaactttagatacgattcaaaaaagaggatatgtagctttagagacgaagcgtttt
gttcctactgagcttggaacaatagttcatcagcttgtgttagagttcttccctgaaatt
ttagacatagagtttaccgcacagatggaaagagatttggatagtgtagaagagggacag
gttaaatgggtagaagtaattgatggcttctatcaggatttcgagaagcgtgtcgtgtat
gcagatgctgagatggagaaaatcgtaattaaagatgaaccaactggggaagattgtgaa
aactgtggttccccaatggtgtataaattagggcgatacggcaaatttatggcgtgcagc
aatttccccgattgtcgcaacacaaaggcaatcatcaaagaaattggggtcccttgccga
gcgtgtggagaaggtcagatagttgaaagaaaaagtaaaacgaagcgtttattttatgga
tgtgaccaatatccgacatgtgaattcgtttcttgggataagccgataagtcgaccatgt
ccgaagtgtaacgaaatgttagtagagaaaaaactgaaaaaaggtatacaaatacaatgt
gttgcgtgtgattataaagaagatccgcaaagttag
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