Psychrobacillus psychrodurans: ACQCPR_06605
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Entry
ACQCPR_06605 CDS
T11278
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn02020
Two-component system
ppsn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACQCPR_06605
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACQCPR_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsn03021
]
ACQCPR_06605
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppsn02035
]
ACQCPR_06605
Transcription machinery [BR:
ppsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACQCPR_06605
Bacterial motility proteins [BR:
ppsn02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACQCPR_06605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
ATP-cone
WAC_Acf1_DNA_bd
DUF4140
Motif
Other DBs
NCBI-ProteinID:
XSZ07283
LinkDB
All DBs
Position
1414141..1414911
Genome browser
AA seq
256 aa
AA seq
DB search
MNQDSTDEQLLWKSWTESKDPQAGDLLMKKYIPLVNYHVQRIGAGIPKNISKEELKSLGM
MGLFDALNKFDYRRELKFDTYASFRVRGAIIDGLRKEDWLPRSSREKAKKLESKIEELEQ
KLMRHVSAEEIAEFVEMPVEDVYHTVQEHFFSNVLSIDEQLQESEDAENKSYVIRDDSQK
TPEQQMVKRELIEDLANQIQQLNENEQLVLNLFYTEELTLTVIGEMLGLSTSRISQIHSK
ALFKLRKLLMNEMMNV
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ataaatcaagattcgacagatgagcaacttctttggaagagttggactgaaagcaaagat
cctcaggccggagatttactcatgaaaaaatatataccactagtcaactatcatgtgcaa
agaatcggtgcaggtatccctaaaaatatatctaaagaagagcttaaaagtttaggaatg
atgggattatttgatgctctaaataaatttgactatagaagagagttaaaatttgatacg
tatgcttcgtttcgtgtaagaggggctatcattgatgggttgaggaaggaagattggctt
ccgcgctcttcgcgagaaaaagcgaagaaattagaatctaaaattgaagaactcgagcaa
aagttgatgagacatgtatccgccgaagaaatagcggaatttgtcgaaatgcctgttgaa
gatgtataccatacagtacaggagcattttttctcgaatgtactgtcaatcgatgagcag
ctacaagaaagtgaagatgctgaaaataaatcgtatgtcattcgagatgactctcagaaa
actccagaacaacaaatggttaaacgagagctaattgaagatttagcaaatcaaattcaa
caactaaatgaaaatgaacaattagtgttaaatttgttttatacagaggaattgacgctt
acagttattggagaaatgctaggtttgtctacttctagaatatctcaaattcattcgaaa
gcactttttaaactacgaaagctattaatgaatgaaatgatgaatgtataa
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