Psychrobacillus psychrodurans: ACQCPR_06715
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Entry
ACQCPR_06715 CDS
T11278
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQCPR_06715 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsn03019
]
ACQCPR_06715 (pnp)
03016 Transfer RNA biogenesis [BR:
ppsn03016
]
ACQCPR_06715 (pnp)
Enzymes [BR:
ppsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACQCPR_06715 (pnp)
Messenger RNA biogenesis [BR:
ppsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACQCPR_06715 (pnp)
Transfer RNA biogenesis [BR:
ppsn03016
]
Prokaryotic type
tRNA degradation factors
ACQCPR_06715 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XSZ06715
LinkDB
All DBs
Position
1436490..1438610
Genome browser
AA seq
706 aa
AA seq
DB search
MSEKKVFTYEWAGRPLQVEIGQLAKQANGAVLVRYGDTTVLSVATASKNPKNLDFFPLTV
NYEEKLYAVGKIPGGFIKREGRPSERAILTSRLIDRPIRPLFPDGFRNEVQVISIVMSVD
QNCSSEMAAMLGSSLALSVSDIPFDGPIAGAQVGLIGEELIINPTVEQMEKSTLDLTVAG
TKDAINMVEAGAKEVSEETVLEAIMFGHNEIIKLIEFQEKVVAEVGKAKKDIPLFELDKE
LFEEVKGICEVKLVQAIQVQEKHAREDAITEVKTEVLEQYTEKEATDETLKQVREILDAM
VKDEVRRLITEDKIRPDGRGVAEIRPLSSEVGVLPRTHGSGLFTRGQTQALSICTLGPLG
DVQIIDGIGLEETKRFMHHYNFPQFSVGETGPIRAPGRREIGHGALGERALEAVIPDEAD
FPYTLRLVAEVLESNGSTSQASICASTLAMMDAGVPLKAPVAGIAMGLVKKGEHYTILTD
IQGMEDHLGDMDFKVAGTSKGITALQMDIKIDGLSRTILEEALEQAKIGRMQILESMLAT
ISDPREKLSKYAPKIVVIKINPDKIRDVIGPGGKQINKIIDETGVKIDTEQDGTIYIASA
DEEMIARAKEIIENIVRVAQVGEYYLGKVKRIEKFGAFVEIFSGKDGLLHISEIQEERTK
NVEDVLKLGDELLVKVIEIDNQGRVNLSRKVVIKEEKERAEQQENK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagaaagtatttacgtacgaatgggcaggacgcccgttgcaagtagaaata
ggacaacttgcaaaacaagcgaacggagcagttttagtaagatacggagatacaactgta
ttatctgtagcaactgcgtcgaagaaccctaagaatttagacttcttcccattaacagtt
aactatgaggaaaaactttacgctgtaggaaaaataccaggtggatttattaagcgtgaa
gggcgtccatcggaacgtgcaatcttaactagtcgtttaattgaccgtccaattcgtcct
ttattccctgatggattccgtaacgaggtacaagttatttcaatcgttatgtctgttgac
caaaactgttcttcagagatggcagcaatgttagggtcttctttagctcttagcgtttca
gacattccatttgatggaccaattgcaggtgcacaagttgggttaattggcgaagaacta
attattaatcccacagttgagcaaatggagaagagtactttagatcttactgttgctgga
acaaaagacgctatcaacatggttgaagctggagcaaaagaagtttcagaggaaacggtt
cttgaagcaattatgtttggtcataatgaaattatcaagttaatcgaattccaagaaaaa
gtagtagctgaagttggaaaagcgaaaaaagatattcctctgtttgagttggataaagag
cttttcgaagaagtgaagggcatttgcgaagtaaaacttgtacaagcaattcaagtacaa
gaaaagcatgctcgtgaagatgctattactgaagtaaaaacagaagttttagaacaatac
acagaaaaagaagctactgacgaaacgttgaaacaagtgcgtgaaattttagacgcaatg
gtaaaagacgaagttcgtcgtttgattacagaagataaaattcgtcctgatggccgtgga
gtagcggaaatccgtcctctttcgtcagaagttggcgtattacctagaacacatggttct
ggattgtttacacgtggtcaaacacaagctttgagtatatgtactttaggacctctaggt
gatgttcaaattattgatggtatcggtctagaagaaactaaacgcttcatgcaccattac
aacttcccacaatttagtgttggagaaactggtcctatacgtgctccaggtcgtcgtgaa
attggacacggtgcattaggagaacgtgctttagaagcagttattccagatgaagctgat
tttccatatacacttcgtttagtagctgaagtattagaatctaatggttctacatcacaa
gctagtatttgtgcgtctactcttgcaatgatggacgcaggtgttcctttaaaagcacct
gttgcgggtattgcaatgggacttgtgaaaaaaggcgaacattatacaattttaacggat
attcaagggatggaagatcatctaggagatatggactttaaagtagctggtacatctaaa
ggaatcacagcacttcaaatggacattaaaattgatgggttatcaagaacaattcttgaa
gaagcgttagaacaagctaaaattggccgtatgcaaattttagaaagtatgcttgcaaca
atttctgacccacgtgagaagttgtctaaatatgcgcctaagattgttgttatcaagatt
aatccggataaaatccgtgatgtaattggaccaggtggtaaacaaattaataaaattatc
gatgaaacaggcgtgaaaattgatacagagcaagatggtacaatttatatcgcttcagct
gatgaagagatgattgcacgtgcaaaagaaattatcgaaaacatcgtgcgagttgcccag
gttggcgaatattacttaggaaaagtaaaacgaattgaaaaattcggtgccttcgtagag
attttctcaggaaaagatggtttattgcatatttcggaaattcaagaggaacgtacgaaa
aatgtagaggacgtccttaaattaggtgatgagcttttagtgaaagtaatcgagatcgac
aatcaaggtcgtgtcaatttatctcgtaaagttgtaattaaggaagaaaaagaacgcgct
gagcaacaagaaaacaaataa
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