KEGG   Psychrobacillus psychrodurans: ACQCPR_06750
Entry
ACQCPR_06750      CDS       T11278                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ppsn  Psychrobacillus psychrodurans
Pathway
ppsn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppsn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACQCPR_06750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsn03019]
    ACQCPR_06750
Messenger RNA biogenesis [BR:ppsn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACQCPR_06750
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2 Pantoate_ligase Gemini_AL1_M
Other DBs
NCBI-ProteinID: XSZ06722
LinkDB
Position
1444625..1446292
AA seq 555 aa
MVKVKNELIRIIPLGGVGEIGKAMYVVEIDEEIFVVDSGLMFPENEMLGIDIVIPDITYL
VENKERVKGIFLTHGHEDAIGSISYLLQKVQAPVYGSKLTIALAKTHLKALPTKQPVKFF
EVTNKSRMNFQGTYVTFFHTTHSIPDSLGIVFHTSEGAIVHTGEFKFDQSAKGKYRPDIA
KIAGLGEDGVFILLSDSTEAERPGYTTSEAVIENQLSETFHAAKGRILVALYASNFIRIQ
QVIDKAIETGKKVAIAGKSLENIFEIGLDLGYFNVEEDTMISIKEISKHNDENIVIIVSG
TQGEPLEALEKMIRKHHKDIKIKDTDTVLITFTPSPGMEVGMYNTMNQIAKVGAKVLTSE
KNVHVSGHGSQEDLKMMLNLTKPKYFIPIQGEYRMLMAHSKLAQATGMSKSEIFIADKGD
IVEYKSGKMRMSGRVQAGNILIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTLNRAQKKI
ASGPEILSRGFVYVRESEELMDESANLVRTVVEKYVNKETFEWTNIKQEIRDTLNSYLFQ
QTKRRPMIIPIIMEY
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttggtaaaagtaaaaaatgaacttattcgaattataccgctcggtggagttggggaaatc
ggaaaagcaatgtatgtagtagaaatagatgaagaaatatttgtcgtagacagtggatta
atgttcccagaaaatgaaatgctaggaatagatatcgttataccagatattacgtattta
gtggaaaacaaagaacgtgtaaaagggatctttttaacgcatggtcacgaggatgcgatt
ggttctatttcttatttactacagaaggtacaagcaccagtttatggttctaaattgact
atagctctggcaaaaacgcatttaaaggcgttgccgacaaagcaaccagtcaaatttttc
gaagtaacaaacaaaagtcggatgaatttccaaggtacatatgtaacctttttccataca
acgcatagtataccggattcactcggaattgttttccatacttctgaaggggcaattgtt
cacacaggggaatttaagtttgatcaatcggctaaaggaaaatatcgtccggacatagca
aaaatagctggtttaggtgaagatggtgtatttattcttctatctgattcaactgaagca
gaaagaccaggttataccacatcagaagcggtaattgaaaaccaattatcagaaacattc
cacgctgctaaaggacgtatacttgttgctctatatgcatcaaactttatccgtatacaa
caagtaattgacaaagctattgaaactgggaaaaaagttgcgattgcagggaaaagctta
gaaaatatttttgaaattggtttagaccttgggtatttcaatgtagaagaggacacaatg
atttctattaaagaaatctctaaacataatgatgaaaatattgtaatcattgtatctggt
acgcaaggagaaccattagaagctttagaaaaaatgatccgtaaacaccataaagatatt
aaaataaaagatacagatacagtcttaatcacttttactccttctcctggtatggaggta
gggatgtataacacgatgaaccaaattgcaaaagttggagcgaaagtactaacttctgaa
aaaaatgtccatgtttccggtcatggaagtcaagaagatttgaaaatgatgcttaactta
acaaagcctaaatactttataccgatccaaggggaatatcgcatgttgatggcccattcg
aaattggctcaagcaactggaatgtccaaatcggaaattttcattgccgataaaggcgat
attgttgaatataagagcggtaaaatgagaatgagtggtcgagttcaagctggaaacatt
ttaatcgatggaattggtgttggtgatgtaggcaatattgttctgcgcgatcgtaagcta
ctttcacaagatggtatatttattgtagttgttacgttaaacagagcacagaagaaaatt
gcttccgggccagaaattctttcgagaggatttgtctatgttcgtgagtctgaagagcta
atggacgagtctgctaacttagttagaactgttgttgaaaaatatgtgaataaagaaacg
tttgaatggacaaacataaaacaagaaatccgtgatacgctaaattcatatttattccag
caaacaaaaagacgtccaatgatcatcccgattattatggaatattaa

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