Psychrobacillus psychrodurans: ACQCPR_11120
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Entry
ACQCPR_11120 CDS
T11278
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ppsn Psychrobacillus psychrodurans
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsn03019
]
ACQCPR_11120
03009 Ribosome biogenesis [BR:
ppsn03009
]
ACQCPR_11120
Enzymes [BR:
ppsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACQCPR_11120
Messenger RNA biogenesis [BR:
ppsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACQCPR_11120
Ribosome biogenesis [BR:
ppsn03009
]
Prokaryotic type
rRNA helicases
ACQCPR_11120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
NAT10_TcmA_helicase
Cas3-like_C_2
AAA_22
DEXQc_Suv3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XSZ03842
LinkDB
All DBs
Position
complement(2301907..2303205)
Genome browser
AA seq
432 aa
AA seq
DB search
MSKYTDYSFQPFLLDAIEKLGFQEPTPIQREMIPLVLKGKSAIGQAHTGTGKTHSFLIPI
VEKIDASKIEVQAVITSPTRELATQIYNELNKLVEGTEIQTKLFIGGTDKARSIEKLKTQ
PQIVVGTPGRLRDLTVEQALLVHTSNVLVVDEADLAFDLGFINEIDQFASRMPEKLEMFV
FSATIPEKLQPFLKKYMDSPVHIKIGEKRRVAEGIEFIVTPVRSKSRKKRLLDVMEGINP
YLAIIFANTKQHADEVANYLQGNGVKVGIVHGDISPRDRKRVMKQIHDLEFQYIVATDLA
ARGIDIPGVSHVINYELPDDLEFFVHRVGRTARAGMTGIAISLYEPSDEDALVRLEKMGI
PLEHKDVINGEWSELKERHARKNRTKNENEIDAIAKAQVRKPKKVKPGYKRNMKWEMDKV
KKRERRIKNRKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatatacagattatagttttcagccttttttactagacgcaatagaaaaatta
ggcttccaagaaccaacgccaattcaaagagaaatgattccacttgttttaaaagggaaa
agtgcgattggccaagcacatactggaacaggaaaaacacatagttttttgatcccaatt
gttgaaaaaatagatgctagtaaaatagaagtacaagcagttattacatcaccaacaaga
gagcttgcaacacaaatttataatgagttgaacaagctagtagaaggcacagaaattcaa
acaaaattatttatcggtggaacggacaaagcccgttcaatcgaaaaactaaaaacacaa
ccacaaattgttgttggaacaccaggtagacttcgtgatcttacagtagagcaagcatta
cttgttcatacctctaatgttttagttgttgatgaagctgacttagctttcgatctaggt
tttatcaatgaaatcgatcagtttgcatctcgcatgcctgagaaactagaaatgtttgta
ttttctgctacaattccagaaaaattacaacctttcttaaaaaaatatatggattcacct
gttcatattaaaataggcgagaaacgtcgagtagcagagggtattgaatttattgtaact
ccagttcgaagcaaatctaggaagaaacgtttacttgatgtaatggaaggtattaatcca
tacctagcaattatatttgcaaatacgaaacaacatgcagatgaagtagctaactattta
caaggaaatggtgtaaaagttggtatagttcatggggacatttcgccacgtgatcgtaaa
cgagtgatgaaacaaatacatgacctagaatttcagtatattgtagcaacagacttagct
gcacgcggaatcgatattcctggtgtcagccatgttattaactatgaacttccagacgat
ttagagtttttcgttcatcgtgtaggaagaacggcacgtgctggaatgacaggtattgca
atttcattatatgaaccatcggacgaagatgcgctagtacgtcttgaaaaaatgggtatt
cctcttgaacataaagatgtgataaatggagaatggtcagaacttaaagaacgtcatgca
cgtaaaaaccgtacgaaaaatgaaaatgagatagatgcaatagctaaagctcaagtacgt
aaacctaaaaaggttaaacctggctacaaacgtaatatgaagtgggaaatggataaagtg
aaaaaaagagagagacgtattaaaaaccgtaagaaataa
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