Psychrobacillus psychrodurans: ACQCPR_11315
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Entry
ACQCPR_11315 CDS
T11278
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03030
DNA replication
ppsn03430
Mismatch repair
ppsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQCPR_11315 (holA)
03430 Mismatch repair
ACQCPR_11315 (holA)
03440 Homologous recombination
ACQCPR_11315 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsn03032
]
ACQCPR_11315 (holA)
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_11315 (holA)
Enzymes [BR:
ppsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQCPR_11315 (holA)
DNA replication proteins [BR:
ppsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQCPR_11315 (holA)
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQCPR_11315 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
XSZ03879
LinkDB
All DBs
Position
complement(2343464..2344468)
Genome browser
AA seq
334 aa
AA seq
DB search
MISEKWMQISNNNISSVYLLYGNEAYFIEETLKRIKRQLNDQGELEVITFDMEESKVDEV
MYEADTIPFFSDKKLVIAKNAFFLKATEKGKEKIIHDTVSLEEWLKSPSPSAITVFIAPY
EKLDERKKITKAMKQTANVIESVSLQVHDLKGWILHELSTHGKTMSDESIDCLIELGGTD
LVHLQTELAKIATFVGEEQEIDSDTIKKLLVRTLEQDVFTLGNAYLSGHKSEAIEIYHDL
LKRKEDPLKLNALIATQVRLMVQVSHLKKKGYHAQQIANQLKVHPYRVKLLIDHPMLHNE
QKLLQTLNDLATVDLQLKTLNINRDRILEMFLLK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagaaaagtggatgcagatatctaataataacatttcttctgtgtatttatta
tatggaaatgaagcatattttatcgaagaaacattaaaaagaattaaaagacaattaaat
gatcaaggggaattagaagttatcaccttcgatatggaggaaagtaaagtagacgaggtt
atgtatgaggcagatactattccttttttttcagataagaaactggttatagcaaaaaat
gcattctttttaaaagcgactgaaaagggaaaagaaaaaataatccatgatacggttagt
ctagaagagtggttgaaatctccttcaccatcagcaatcactgtttttatagcaccttat
gaaaaactagacgaacgtaagaaaattacaaaagctatgaaacagacagccaatgttatt
gagtcagttagcttacaggtccatgatttaaagggatggattttacatgaactttctaca
catgggaaaacgatgtctgatgagtctatagattgccttattgaacttggtggaacggat
cttgttcatctgcagacagagttagcgaaaatagcaactttcgttggcgaagagcaagaa
atcgatagtgacacaataaagaagttgcttgtacgtacactagagcaggatgtttttaca
ttaggaaatgcttatctttcggggcataaaagtgaagcgattgaaatttatcacgattta
ttgaagagaaaagaggatccattaaagctaaatgctttaatagcaacacaagttagatta
atggtccaggtaagccacttaaagaaaaaaggctatcatgctcagcaaattgccaatcag
cttaaggtccatccatatcgagtaaagttattaatagatcaccctatgcttcacaatgaa
caaaaactgctgcaaacattgaatgatcttgcgacagtcgatttacagttaaaaacacta
aatataaatcgagatagaattttagagatgtttttgctgaagtaa
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