Psychrobacillus psychrodurans: ACQCPR_12205
Help
Entry
ACQCPR_12205 CDS
T11278
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03030
DNA replication
ppsn03410
Base excision repair
ppsn03420
Nucleotide excision repair
ppsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQCPR_12205 (polA)
03410 Base excision repair
ACQCPR_12205 (polA)
03420 Nucleotide excision repair
ACQCPR_12205 (polA)
03440 Homologous recombination
ACQCPR_12205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsn03032
]
ACQCPR_12205 (polA)
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_12205 (polA)
Enzymes [BR:
ppsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQCPR_12205 (polA)
DNA replication proteins [BR:
ppsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACQCPR_12205 (polA)
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACQCPR_12205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACQCPR_12205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
XSZ04048
LinkDB
All DBs
Position
complement(2524313..2526940)
Genome browser
AA seq
875 aa
AA seq
DB search
MATEKILLLDGNSLAYRAFFALPLLTNEHGVHTNAAYGFTMMLQKIMEEENPTHMLVAFD
AGKTTFRHSTFGEYKGGRQKTPPELSEQFPYIRKLIDAYGIKRYELEMYEADDIIGTLSK
QADEKGQQVVIVSGDKDLTQLATDNTTVYITRKGITDIEKYTPEHIQEKYGLSPLQIIDM
KGLMGDASDNIPGVPGVGEKTAIKLLKEHGSVEDLYKALDKVSGVKLKEKLVANEEQAIM
SKALATIEIAAPIQVSIEDISYNGPNMEDVIEVWKELSFKTLLEKSEYVSEDPETTEVEF
QIVEEIDSTVLDKVMAVHLEMYDVQYHTSELLGIALSDGEKGYFAPAEIAFQSKDFCSWL
ENDTNKKYLADSKATQAVSRKHNVNVQGVEFDLLLAAYIVNPAISSEDVAAIAKEFGYFN
LLANDTVYGKGAKKTPPEIEKIAEHAVRKARAIWDLKEKLEVKLEENEQYELYKEIELPL
ASILGTMESDGVLVDKQILVEMGHELNIKLQVIEQDIYTLAGETFNINSPKQLGVILFEK
IGLTPIKKTKTGYSTAADVLEKLANEHEIIEQILLYRQLGKLNSTYIEGLLKEIHKDDGK
IHTRYQQALTSTGRLSSINPNLQNIPVRLEEGRKIRKAFVPSQPGWVMFAADYSQIELRV
LAHMSKDENLVDAFNNDLDIHTKTAMDVFHVEQEDVTSDMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAAKFIENYLNSFPGVKEYMDDIVHDAKQSGYVTTILNRRRYLPEITSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMAARLKVENMQTKMLLQVHDELIFEAPPEEI
ALLEKIVPEVMENAIKLIVPLKVDYAFGSSWYDTK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaccgaaaaaatcctattattagatggcaacagtttggcttaccgagcttttttt
gccctacccctattaacgaatgaacatggtgtacatacaaatgcagcgtatggctttaca
atgatgctacaaaaaattatggaagaagaaaatccaactcatatgttagtggcttttgac
gccggaaaaacaactttccgtcattctacatttggcgaatataaaggtggaagacaaaaa
actccgccagagctttcagaacaatttccatatatacgtaagttgatcgatgcttatggt
attaagcgttatgaactggaaatgtacgaggcggacgacattattggtactttaagtaag
caagcagatgaaaaaggtcaacaagtcgtaattgtttctggagataaagatttaacacaa
ttagctactgataatacaacagtatatatcacgagaaaaggtattaccgatattgaaaaa
tacacacctgagcatattcaagaaaagtatggtttaagtcctttacagattattgatatg
aaaggcttaatgggggatgcttccgataatatacccggagtacctggtgtcggagaaaag
acagctattaagcttttaaaagaacatggttcggtagaggatttatataaggcacttgat
aaagtgagtggtgttaagctaaaggaaaaacttgttgctaatgaagaacaggcaattatg
agtaaggcgctagctacgatagaaatagcagcaccaatccaagtctcaattgaggatatt
tcttataatggtccaaatatggaagacgtaattgaagtttggaaggaactatcctttaaa
acacttttggagaaatctgaatatgtttctgaagatccagaaacgacagaggtggaattc
caaattgttgaagaaatagactctactgtattagataaagtgatggcagtccatttggaa
atgtatgatgttcaataccatacaagcgaattattaggcattgctttatcggatggagaa
aaaggttactttgctcccgcagagattgcttttcaatctaaggatttttgttcgtggtta
gagaatgatacaaataaaaagtatttagcagattccaaagcaacacaagcagtgagcaga
aaacacaatgttaatgttcaaggagttgaatttgacctgctcctagcagcgtatatagta
aatccagctatttcgtcagaggatgttgcagctattgcgaaagaatttggttactttaac
ttgttggcaaacgatactgtttacggaaaaggtgccaaaaaaactcctcctgaaatcgag
aaaattgcagaacatgcagttagaaaagcaagggcaatatgggacttaaaagaaaagtta
gaagtgaagcttgaagaaaatgaacagtacgagttgtataaagaaatagagctacctctt
gcatctatcctaggcacgatggaatccgatggtgttttagtggataaacaaatacttgta
gaaatgggtcatgaactcaatattaaattacaggtgattgaacaagacatttatacacta
gcgggagaaacattcaatattaattctcctaaacaattaggcgtaatactatttgaaaaa
attggacttacacctattaaaaagactaaaacaggttattcaaccgcagcggatgttctt
gaaaaactagcaaatgaacatgaaataattgaacaaattctactatatcgtcaattaggt
aagctcaattcgacatatattgaaggattgttaaaagagattcacaaagatgatgggaaa
attcatactcgttatcaacaagcgctaacttcaacagggcgtttaagttctataaatccg
aacctgcagaatataccagtacgtttggaggaaggtagaaaaatacgaaaagcctttgtt
ccttctcaacccggatgggtaatgttcgctgcggattactctcagattgaattacgtgtt
cttgcgcatatgtctaaggatgaaaacttagtagatgcttttaataatgatttagatatc
catactaaaacggctatggatgtcttccatgtggaacaggaagatgtgacatccgatatg
cgtcgtgctgccaaggcggttaactttggtattgtgtatggtattagtgattatggttta
tcgcaaaatctagatattactagaaaagaagcagcgaaatttatcgagaattatttaaat
agcttccctggagtaaaggaatatatggacgatattgttcatgatgcaaaacaatcagga
tatgttactacaatccttaatagaagaaggtatttaccggaaataacgagttcaaatttt
aatctaagaagctttgcagaacgaacggcgatgaatacaccaattcaaggaagtgctgca
gatattattaaaaaagcgatgattgatatggcagctcgattaaaagtagaaaatatgcaa
actaaaatgttattacaagtacatgatgagttaattttcgaggcacctccagaggagatt
gcattattagaaaaaatagtaccagaagtaatggaaaatgctattaagctgattgtacct
ttgaaagtggattatgcctttggttcatcgtggtatgacacgaagtag
DBGET
integrated database retrieval system
