Psychrobacillus psychrodurans: ACQCPR_13725
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Entry
ACQCPR_13725 CDS
T11278
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03030
DNA replication
ppsn03430
Mismatch repair
ppsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQCPR_13725
03430 Mismatch repair
ACQCPR_13725
03440 Homologous recombination
ACQCPR_13725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsn03032
]
ACQCPR_13725
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_13725
Enzymes [BR:
ppsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQCPR_13725
DNA replication proteins [BR:
ppsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQCPR_13725
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQCPR_13725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
DNA_pol_B_exo1
DUF3098
Motif
Other DBs
NCBI-ProteinID:
XSZ04319
LinkDB
All DBs
Position
complement(2800415..2801137)
Genome browser
AA seq
240 aa
AA seq
DB search
MGFEPFMQILRGIQGKRTNVGIGDIQSAQQMAFLRNLQKELKKEDSLEIPLDELKIVVFD
IETTGFNPEQGDEIISIGAIKMHGSSIREDDTFYSLIYSEKEIPLDIVELTGITNEQLED
ASLVGDVLIEFLQYTKDCTLVAHHANHERNFMQFTSNKVFRTPFKNRIVDTSFLYKIAEP
KIQLSSLEDLCEHNSIPIVGRHNALEDARMAAKLWSIYTEKVKMLGCETLQDVYEKFARI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgaacctttcatgcaaatactcagaggcattcaaggaaaacgtacgaatgtt
ggcataggtgatattcaaagtgcccaacaaatggcttttttaagaaacctgcaaaaagaa
ttgaaaaaagaggattcactagaaattccattagatgagcttaaaattgtcgtgttcgat
attgagacaactggctttaatccagagcaaggagatgaaattatctccattggtgccatt
aaaatgcatggctcttctatacgagaggacgatactttctactcgcttatatactcagag
aaagaaattcctttggatattgtcgaactgacaggcattacaaatgaacaattggaggat
gctagtctagttggggatgtactaattgaatttcttcaatatacaaaagactgtacactt
gtagcacatcacgctaatcacgaaagaaattttatgcaattcactagcaacaaagtattc
cgcacaccttttaaaaatcggatagttgatacttcttttctttataaaattgctgagccc
aaaatacaactaagttcgttagaagacttgtgtgaacataacagcattccaatagttggc
cgacataatgcattagaggacgcaagaatggcagctaagctttggagtatttatacagaa
aaagttaaaatgcttggctgtgaaacattgcaggatgtatacgaaaagtttgcaagaatt
taa
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