Psychrobacillus psychrodurans: ACQCPR_14520
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Entry
ACQCPR_14520 CDS
T11278
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACQCPR_14520 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_14520 (uvrA)
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACQCPR_14520 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACQCPR_14520 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_16
AAA_21
AAA_33
AAA_25
DnaJ_CXXCXGXG
AAA_22
ATPase
NACHT
cobW
SLFN-g3_helicase
Viral_helicase1
NB-ARC
BCA_ABC_TP_C
DUF2972
Motif
Other DBs
NCBI-ProteinID:
XSZ04461
LinkDB
All DBs
Position
complement(2949544..2952435)
Genome browser
AA seq
963 aa
AA seq
DB search
MKNQEIVIQGARANNLKNVSLKIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDVIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYMRLLYARVGKP
ICPNHGIEISSQTIEQMVDRLSEYPEKTKMQVLAPIVSGRKGTHVKLLEEMKKEGFVRVR
INGELIDLDDDINLDKNKKHNIEVVIDRIIMKEGVAARLSDSLESALRIADGKVLIDVME
HEEILFSEHHACPICGFSIGELEPRMFSFNSPFGACTDCDGLGTRLEVDPDLVVPDKSVT
LADGAIVAWQPTSSQYYPKLLEAVCKHYKIKMNVPVEKLPIDQWNKIMYGSDNDKFRFRY
ENEFGQVRDSMISFEGVLANIERRYKDTSSDYIREQMEKYMEQHDCPTCNGYRLKEETLA
VKINSLHIGEITKYSIEEANKFFNELSLSEKDMQIARLVLREINERLGFLDNVGLDYLTL
NRASGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIETLKNMRDIGNT
LIVVEHDEDTMMAADYLIDVGPGAGVHGGEIIAAGTPEQVMKNKKSLTGQYLSGQKFIPL
PVDRRKPDGRFIKIKGASENNLKNVSVDIPLGVFTAVTGVSGSGKSTLVNEILYKSLAQK
LNRSRVKPGVNKGVEGMEMLEKVIEIDQSPIGRTPRSNPATYTGVFDDIRDLFATTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGILKIEMHFLPDVYVPCEVCHGKRYNRETLEVQYKG
KNIADVLKMTAEDGYAFFENHPKISRKIKTIVDVGLGYMELGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHVDDIARLLIVLQRLVDNGDSVLVIEHNLDVIKTADYMI
DLGPEGGDKGGTIVAVGTPEKIIASKDSYTGKYLKTILERDRQRMDQVVTKATKKKKSPV
STT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatcaagaaatcgtgattcaaggtgcacgtgcaaataatttaaaaaatgtaagc
ttgaaaataccaagagataagctagtagtcatgactggcctttctggctctggtaaatcc
tccttagctttcgatacaatttacgcggagggacaacgtcgatatgtagagtcattatca
gcctatgcacgacaatttttggggcaaatggaaaagccagatgtcgacgtcattgaggga
ctatcaccagctatttctatcgatcaaaaaacaactagtaaaaacccacgctctacagta
gctactgtgacggagatttatgactatatgcgactattgtatgctcgagttggaaaacca
atatgtccaaatcatggtattgaaatttcatctcaaacgattgaacagatggttgatcgc
ttaagtgaatatccagaaaaaaccaagatgcaagtgctggcaccaattgtttcaggacgt
aaagggactcatgtaaagcttttggaagagatgaaaaaagaaggtttcgttcgtgtacgt
attaatggagagttaatcgatttagacgatgatatcaacctagataaaaataaaaaacat
aatattgaagttgtcatcgacagaattattatgaaagaaggagttgctgcaaggcttagt
gattctctagagtcagctctaagaattgcagatggcaaagttttaatagatgttatggaa
cacgaagaaattctatttagtgagcatcacgcctgtccgatatgtggattttctatagga
gaattagaaccacgaatgttttcttttaatagtccatttggtgcttgtactgattgtgat
ggacttggtacaaggttagaggtggatcccgatttagttgttccagacaaaagcgtcact
ctagcagacggagccattgttgcatggcagccaacgagctctcagtattatccgaaactc
ttagaggcagtatgtaagcattacaaaataaaaatgaatgttccagttgaaaaattgccg
attgatcaatggaacaaaattatgtatgggtcagacaatgataaattccgttttcgatat
gaaaatgagtttggacaagttcgagatagcatgatttcatttgaaggagttcttgcgaat
atagagcggagatataaagatacgtcgtccgattatattcgtgagcaaatggaaaaatat
atggagcagcatgactgtcctacatgtaatggctatcgcctaaaagaagaaacacttgca
gttaagataaattccctacatattggggaaattacaaagtactccattgaagaagcaaat
aagtttttcaatgaactgagcttatctgaaaaagatatgcaaattgctcgacttgtgctg
agagagattaatgaacgtttaggttttctggataatgttggactagattatttaacatta
aaccgtgcttctggaacgttatcaggtggggaagcgcaacgtattcgtctggcaactcaa
attggctcaagactgacaggggtattatatattttggatgaaccctctatagggttacat
caacgagataatgatcgattgatcgaaacattaaaaaatatgcgagatattgggaacacc
ttaatagttgtagagcatgatgaagatacaatgatggcggcagactatttaatagacgtg
ggaccaggtgcaggagtgcatggcggagaaataatcgctgcaggaactcctgaacaagtg
atgaaaaataaaaagtctttaaccggacaatatttaagtggtcaaaagtttattccactt
cctgtggatagaagaaaaccagatggtcgctttatcaaaataaaaggcgcttcagaaaac
aacttgaaaaacgtgagtgtagatattccattaggtgtatttacagctgttacaggagtt
tcaggatcagggaaaagtacattagtaaatgaaatattatataaatcattagcccagaag
ttaaaccgctcaagagtgaaacccggcgtcaataaaggtgtcgaaggtatggaaatgcta
gaaaaagttattgagattgatcagtctccaatcggtcgtaccccgagatctaacccagct
acctatacaggagtttttgatgatattcgtgacctttttgcaacgacaaatgaagcaaaa
gtaagaggatacaaaaaaggtagattcagtttcaatgtaaaaggcggacgttgtgaggcc
tgtcgcggagatgggattctcaaaattgaaatgcacttcctacctgatgtctatgtacca
tgtgaagtctgccatggaaaaagatataatcgtgagactttggaagtgcaatacaagggc
aagaatattgcggatgtcctaaaaatgactgcagaagacggctatgcctttttcgaaaac
cacccgaaaatcagtcggaagataaaaacaattgtagatgtgggacttggatatatggaa
ttagggcaaccagcaacgactctatctggtggtgaggcgcagcgagtgaagctagcatct
gaattacacaagcgttctaacgggaagtctttttatattttggatgaacctactacaggt
cttcatgtagacgatatcgcaagattgctaatagtacttcaacgtttagtagataacgga
gatagcgtattagtgattgagcataatctggatgtcattaaaacagcagattatatgatt
gatctaggaccagaaggtggagataaaggaggaacaatcgttgcagtaggtacaccagag
aaaattattgcatcgaaagattcatatacagggaagtacttgaaaaccattttagaaaga
gatagacaacggatggatcaagtagtaacaaaagcgactaaaaagaaaaaaagtcccgta
tcgactacatga
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