Psychrobacillus psychrodurans: ACQCPR_15615
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Entry
ACQCPR_15615 CDS
T11278
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppsn Psychrobacillus psychrodurans
Pathway
ppsn00300
Lysine biosynthesis
ppsn00470
D-Amino acid metabolism
ppsn01100
Metabolic pathways
ppsn01110
Biosynthesis of secondary metabolites
ppsn01120
Microbial metabolism in diverse environments
ppsn01230
Biosynthesis of amino acids
Module
ppsn_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
ppsn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACQCPR_15615 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACQCPR_15615 (dapF)
Enzymes [BR:
ppsn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACQCPR_15615 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
DUF6071
Motif
Other DBs
NCBI-ProteinID:
XSZ04657
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All DBs
Position
3156257..3157099
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AA seq
280 aa
AA seq
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MKIPFTKMHGCGNDYIYINCFEHTIDDPNTLSQHISDRHFGIGGDGIVLICPSDIADAKM
RMFNIDGSEGKMCGNAIRCVAKYVYDNNIATKEVLTIDTLSGVKTMELYIENGKMNFAKV
DMGKAILEPALIPVQSKETNPLINLPLQVEDKTYHITTVSMGNPHCVIFVEDPMLVDLPL
IGPKFEQHSFFPESVNTEFISVENRKTIHMRVWERGSGETLACGTGACAAVVAAVLNGNC
DKDSDITVKLLGGELIIRYTDEGVYMTGPAVSVFNGEIEV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccttttactaagatgcatggctgcggaaatgattatatttatattaactgt
tttgagcatactatcgatgaccctaatacactaagccagcatatatctgaccgccatttt
ggaattggtggggatgggatagtattaatatgtccatccgatattgcagatgcaaagatg
cgaatgttcaacatagatggtagtgaagggaaaatgtgtggaaatgctatccgctgcgtt
gctaaatacgtgtacgataataatatcgctacaaaagaagtgttaacaattgataccctt
agtggcgttaaaacaatggaactctatattgaaaatggcaaaatgaattttgccaaagta
gacatgggcaaagccattttagaacctgcacttatacccgtccaatcaaaagaaacaaat
ccgttaataaacttaccacttcaagtagaagacaaaacatatcacatcacaacagtgtct
atgggcaatcctcactgtgttatttttgtggaagatccaatgttggtagacttaccatta
attggtccaaaatttgaacaacactcatttttcccggaaagcgtaaatacagagtttatt
tctgtagagaatcgtaagactattcatatgcgtgtatgggagcgcggtagtggagaaacg
cttgcctgcggaactggggcatgcgctgcagtcgttgcggcagttttaaatggtaactgc
gacaaagattccgatattaccgtaaaattactaggcggggaacttatcatacgttatacc
gatgaaggtgtatatatgacaggtcctgcagtaagtgtcttcaatggtgagattgaagtg
tag
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