Parasedimentitalea psychrophila: QPJ95_02995
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Entry
QPJ95_02995 CDS
T09434
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppso
Parasedimentitalea psychrophila
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppso03032
]
QPJ95_02995 (topA)
03400 DNA repair and recombination proteins [BR:
ppso03400
]
QPJ95_02995 (topA)
Enzymes [BR:
ppso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QPJ95_02995 (topA)
DNA replication proteins [BR:
ppso03032
]
Prokaryotic type
DNA Topoisomerases
QPJ95_02995 (topA)
DNA repair and recombination proteins [BR:
ppso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QPJ95_02995 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
WIY25919
UniProt:
A0A9Y2P520
LinkDB
All DBs
Position
608150..610882
Genome browser
AA seq
910 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSNYTVLASYGHVRDLPPKNGSVDTDNDFEMTWEVGADSRK
HMKAIADALKEDNALILATDPDREGEAISWHLQEALTKRRSIKKDTPVSRVTFNAITKDA
VLEAMANPRQVDMPLVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVCLRLIVE
REMEIEAFNPQEYWSVRALLTTPRGQEFETRLTVLGGDKLDKFSLANSTAAELAVQAVAS
RDLMVQSVEAKPAARNPSAPFMTSTLQQEASRKFGMGAKQTMSTAQRLYEAGYITYMRTD
GIDMAPEAVTEARAEIDKRYGSSYVPDSPRVYKNKAKNAQEAHECIRPTEMGRDAASLKV
TEPDQRKLYDLIWKRTLACQMASARLERTTVDVGSNDRQVVLRATGQVVLFDGFMRVYEE
GRDDVVQDDDDKRLPQIMMGETAKFADTALTPQFNKAAKDGAATTQSGDLRSNGAALLSQ
NESVLALQHHTAPPPRYTEATLVKKMEELGIGRPSTYASVITTIQDREYVRKEQNRLHPE
DKGRIVTIFLLNFFRNYVGYNFTADLENQLDEVSAGNGDYKALLASFWRDFSAAISETSD
LRISEVLDVLDDALAPQLYPPREDGTDPRACPKCGLGQLHLKSSRTGGFVGCGNYPECNY
TRPISGEGAEGYERVLGEDDGDEIHLKSGRFGPYVQRGEPTPEVKKPPRSSLPKQNKDYL
PGWGPNEVTLEQAVTLLTLPREIGQHPEGGAVASNLGRFGPYIMHQLPDEEKPVYVNLKN
TLDVFEVGMNHAMEMLAEKRANPGRGGRAAAKALKELGDHPDGGGAVVIMDGKYGPYIKW
EKVNATLPKDVEVKDVTMDMAVQLITEKSGKKPTKKKAAPKKKPAAKKKPAAKKKAPAKK
APAKKAAAKD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtagttgttgtagaatcccctgccaaagcaaaaacgatcaataaatatctcggc
tcaaactacaccgttttggcatcttatggccacgtgcgcgaccttccgcctaagaatggt
tcggtcgataccgacaatgatttcgaaatgacatgggaggtcggggccgacagccgcaaa
catatgaaggccattgccgacgccctgaaagaagacaacgcactgatcctcgcgactgac
cccgaccgcgagggagaggcgatcagctggcacctgcaagaggcgctgaccaaacggcgt
tcgatcaagaaggacaccccggtcagccgggtcacgtttaatgccatcaccaaggacgcc
gtgctcgaggcgatggccaatccgcgtcaggtcgacatgccgctggtcgaggcctatctg
gcgcggcgggcgctggactatctggtcggcttcaacctgtcgccagtgctgtggcgcaag
ctgcccggcgccaaatcggctggccgggtgcaatcggtatgtctacgcctgattgttgag
cgcgagatggaaattgaggcgtttaatccgcaggaatactggtcggtgcgcgcccttctg
accaccccgcgtggccaggagttcgagacccgcctgacggttctgggcggcgacaagctg
gacaaattcagcctcgccaattctaccgccgccgaactggcagtgcaggccgtcgccagt
cgcgacctgatggtccagtcggttgaggccaagccagccgcgcgcaacccctcggcgcct
ttcatgacctcgaccctgcaacaggaagccagccgtaaattcggcatgggcgccaagcaa
accatgagcaccgcccagcgtctctatgaggccgggtacattacctatatgcggaccgac
ggcatcgacatggcccccgaggcggtgaccgaagcgcgggcggaaatcgacaaacgctat
ggcagttcttatgtgcccgacagcccgcgggtctacaagaacaaggccaagaacgcccag
gaagcccacgagtgtatccgccccaccgaaatgggccgcgatgccgccagcctcaaagtc
accgagcccgaccagcgcaagctctatgacctgatctggaaacgcaccctggcctgccag
atggccagcgccagactggagcgcaccactgtcgatgtcggctccaatgatcgccaggtg
gtgctgcgcgccaccggtcaggtggtgctgttcgacggtttcatgcgggtctatgaagaa
ggccgcgatgatgtggtccaggatgacgacgacaagcgcctgccgcagatcatgatgggc
gagacggcgaaatttgccgataccgcgctgacgcctcagttcaacaaggcggccaaggat
ggcgccgcgacaacccaaagcggcgatctgcgcagcaatggcgcggcgctgctgtcgcag
aatgaatcggtgctggcgctgcaacaccacaccgcaccgccaccccgctataccgaggcg
acactggtcaaaaagatggaagagctgggcatcggccgcccctcgacctatgccagtgtg
atcaccaccatccaggaccgcgaatacgttcgcaaagaacagaaccggctgcaccccgaa
gacaagggccgcatcgtcaccatcttcctgctcaatttcttccgcaactacgtcggctac
aactttaccgccgatctggaaaaccagctcgatgaggtcagcgccggcaatggcgactac
aaggcactgctggccagcttctggcgtgacttctcggcggcaatttccgaaacctcggac
ctgcgcatctccgaagtgctcgacgtgctcgacgatgcattggcaccgcaattatacccg
ccgcgcgaagatggcactgatccgcgtgcctgccccaagtgcggactgggccaattgcac
ctgaaatcctcgcgcaccggcggcttcgtcggctgcggcaactatcccgaatgcaactat
acccgaccgatctccggcgaaggcgccgaaggctatgaacgtgtattgggtgaggatgac
ggcgacgaaatccatctgaaatccggccgtttcggaccctacgtccagcgcggtgaaccg
acaccagaagtcaagaagccgccacgctcctcgctgccgaaacagaacaaagactacctg
cccggctgggggccaaatgaggtcaccctggaacaggctgtcaccctgctgaccctgcca
cgcgaaattggccagcaccctgaaggcggcgccgttgcctctaacctgggtcgcttcggc
ccctacatcatgcatcaactgccagatgaggaaaaaccggtctacgtgaaccttaagaat
accctggacgtttttgaggttggcatgaaccacgcgatggaaatgctggccgaaaaacgc
gccaatccgggccgcggtggtcgggccgctgccaaggcgctaaaggaacttggcgatcat
ccagacggcggcggcgccgtcgttatcatggacggtaaatatggcccttacatcaaatgg
gaaaaggtcaacgccaccctccccaaagatgtcgaggtcaaggatgtcaccatggacatg
gccgtgcagctgatcactgaaaagtctggcaagaagccaacaaagaaaaaagccgccccc
aagaaaaagccagccgccaaaaagaaacccgccgccaagaaaaaagcacccgcaaaaaaa
gccccggcaaaaaaggccgctgccaaagactag
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