Parasedimentitalea psychrophila: QPJ95_04380
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Entry
QPJ95_04380 CDS
T09434
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppso
Parasedimentitalea psychrophila
Pathway
ppso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QPJ95_04380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppso02000
]
QPJ95_04380
Transporters [BR:
ppso02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
QPJ95_04380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WIY26168
UniProt:
A0A9Y2L109
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All DBs
Position
911562..913481
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AA seq
639 aa
AA seq
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MFKIPKFIFAASMTVFLSPLAALASPPVQESDFWRAEVEAGNLPPAAERIPDVPLQVDLA
SRGRTAGVQGGTLNTMITRSKDIRQMVVYGYTRLIGYDADYELRPDLLMSFENQDNRRFI
LNLRPGHRWSNGDPFTSDDFEYWWKDVANNELLNPTGPPDFLRVEGELPVVSFPDPQTVI
YEWTKPNPNFLQSLAQARPPFIFRPAEFLKKYHIKYADPDELAFEVNDARVKSWAALHNK
RDNMYKFDNHELPTLQPWINATSGKKIRHLFVRNPYYHRIDENGVQLPYIDVVEMEIVSG
GLVAAKSNAGEADLQARGLGFRDIAILRKGEADGSNYETYLWGTGTASQIAIYPNLNVND
DTWRNVLRDVRVRRALSLAINRDSINKALYFKLAKPGAMTVLEPSPFFDPELRRAWADWD
PDQANELLDAAGLDQKDRYGIRKLPDGRPMELVIETAGERQEVENALQIITDDWREIGVK
LIMRPLDRDILRNRVFSGTSMASVWYGWDNGLPRPYTSPAYLAPTDQVFLAWPKWGQFHQ
TGGEAGEAPDLPEAQRLMQLVKNWEVATSDAERTAAWTEMLKIHADQVYGIGILAGAPQP
VVVNKSLRNVPVKGIWAWDPGAHFGIHRPDEFFFEGGDG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagatacccaaattcatatttgcagcttccatgacggtgtttttgtcaccgctc
gccgcactggcctctccgccggtgcaggaaagcgacttctggcgcgccgaggttgaagct
ggcaatttgccccctgccgccgaacgcattcccgatgtccccctgcaggtggatctggcg
tcccgtggacgcacagccggggtgcagggcggcactttgaacaccatgatcacccggtcc
aaggatatccggcagatggtggtctacggctacacccggttgatcggctatgacgcggac
tatgaactgcgccccgatctgctgatgtcatttgaaaaccaggacaaccgccgtttcatc
ctgaacctgcggcccgggcaccggtggtcaaatggcgatccctttacctcggatgatttt
gaatactggtggaaagatgtcgccaacaacgaattgctcaacccaaccggcccgcccgac
tttctgcgtgtcgaaggggagctgccggtcgtcagctttccagatccgcaaaccgtcatc
tatgagtggacaaaaccgaaccccaatttcctgcaaagtctggcccaggcgcggcctccg
tttatttttcgtccggcagaattcctgaagaaataccacatcaaatatgccgaccccgat
gagctcgcctttgaagtcaatgacgcccgtgtcaaaagctgggcggcgctgcacaacaaa
cgcgacaacatgtacaagttcgacaaccacgaactgccaaccctgcagccctggatcaat
gcaacctcgggcaaaaagatccgccatttgtttgtgcgcaatccctactaccaccgcatc
gacgagaacggcgtacaattgccctatatcgacgtcgtcgaaatggagatcgtctcgggg
gggctggtggccgcaaaatccaatgccggcgaggccgatctgcaggcgcgcgggctgggc
tttcgcgatattgcaatcctgcgcaagggcgaggccgatggcagcaattatgaaacctat
ctctggggcaccggcaccgcctcgcagatcgccatttatccaaacctgaacgtcaacgac
gacacctggcgtaacgtcctgcgagacgtacgggtgcgccgtgccctgtcgctggcgatc
aaccgcgactcgatcaacaaggcgctgtatttcaagcttgccaaacccggtgctatgacc
gtgctggaacccagcccgttttttgatcccgagctgcgccgggcctgggccgattgggac
ccggatcaggccaatgaactgctggacgctgccggcctggaccaaaaggaccgctatggc
atccgcaaactgcctgatgggcgtccgatggaactggtgattgagaccgcaggtgaacgc
caggaggtcgaaaacgccttgcagatcatcaccgatgactggcgcgaaatcggcgtcaaa
ctgatcatgcggccattggatcgcgacatcctgcgcaaccgggtgttttccggcacctcc
atggcctcggtctggtatggctgggataacggattgccgcgcccctatacctcgcccgcc
tatctggcaccgaccgatcaggtgtttctggcctggcccaaatggggccagttccaccag
accggtggcgaggccggcgaggcccccgacctcccagaagcacagcgcctgatgcagctg
gtgaaaaactgggaggtggccacctcagatgcggaacgcactgccgcctggactgaaatg
ctgaaaattcacgccgatcaggtctatggcatcggcattctggccggcgccccacagccg
gtggtggtcaacaaatccctgcgcaatgttccggtcaagggcatctgggcctgggatccc
ggagcccactttggcatccaccgccccgacgagttcttttttgagggtggtgacggctga
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