Parasedimentitalea psychrophila: QPJ95_05030
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Entry
QPJ95_05030 CDS
T09434
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppso
Parasedimentitalea psychrophila
Pathway
ppso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QPJ95_05030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppso03400
]
QPJ95_05030
Enzymes [BR:
ppso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QPJ95_05030
DNA repair and recombination proteins [BR:
ppso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QPJ95_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WIY26290
UniProt:
A0A9Y2L1L1
LinkDB
All DBs
Position
complement(1040566..1041327)
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AA seq
253 aa
AA seq
DB search
MESALDYHSARALLQWQVELGVTESIGDAPVNRYALQATPPKAKAEQAPAVLKPKEVDPV
EQAQKAARAATGLASLRAALEGFEHCALKKGARNLVFSDGQAGARVMIIGEAPGREEDRA
GTPFAGPSLGLLDKMLAAIDLSRDKNVYLTCALPWRPPQNQELQPADIAMMVPFLQRHVE
LAEPEFLLLMGNAACQAVLGKRGINRLRGEWQQVWGKAVLPMLPPDRLLGQPQGKRQAWA
DLLSLKARLVAVT
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggcattggattatcacagcgcgcgggcgcttttgcagtggcaggtggagctg
ggggtgaccgagagtatcggtgatgcgccggtcaatcgttatgcgttgcaggcgacgccg
ccaaaagcgaaggcggagcaggcgcctgcggtgctcaagcccaaggaggtggacccggtt
gagcaggcgcaaaaggcagcgcgggcggccaccgggctggccagtctgcgggcggcgctg
gaggggtttgagcattgcgccctgaagaaaggcgcccgcaatctggtgttcagcgatggt
caggccggggcgcgggtgatgattattggcgaggcgccgggacgcgaagaagaccgggcg
ggcacgccgtttgccggaccgtcgcttggcttgctcgacaaaatgctggcggcgattgat
ctgtcgcgcgacaagaatgtttacctgacctgcgcgctgccgtggcggccgccgcaaaac
caggaattgcaaccggcggatatcgcgatgatggtgccgttcctgcagcgccatgtggag
ctggccgagccggagtttctgctgctgatgggcaatgcggcctgtcaggcggtgctgggc
aagcgtggcatcaaccggttgcgtggcgagtggcagcaggtctggggcaaggcggttctg
ccgatgctgccgccggatcgactgttgggtcagccgcagggcaaacggcaggcctgggcc
gatttattgtcgctcaaggcgcgattggtggcggtgacgtga
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