Parasedimentitalea psychrophila: QPJ95_05360
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Entry
QPJ95_05360 CDS
T09434
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppso
Parasedimentitalea psychrophila
Pathway
ppso03030
DNA replication
ppso03430
Mismatch repair
ppso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QPJ95_05360 (dnaE)
03430 Mismatch repair
QPJ95_05360 (dnaE)
03440 Homologous recombination
QPJ95_05360 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppso03032
]
QPJ95_05360 (dnaE)
03400 DNA repair and recombination proteins [BR:
ppso03400
]
QPJ95_05360 (dnaE)
Enzymes [BR:
ppso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QPJ95_05360 (dnaE)
DNA replication proteins [BR:
ppso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QPJ95_05360 (dnaE)
DNA repair and recombination proteins [BR:
ppso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QPJ95_05360 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
WIY26346
UniProt:
A0A9Y2L293
LinkDB
All DBs
Position
complement(1115019..1118531)
Genome browser
AA seq
1170 aa
AA seq
DB search
MTSSPRFIHLRTHTEYSLLEGALRLKKLSDLCKGAEMPAIAVTDTNNMFAALEFSVTLSG
AGIQPILGCQVDFTYQQAAPGEKPRTPAPLVLLAQSEVGYENLMKLNSCLYLDKGHQLPQ
VTLDELQQYSAGLICLSGGPNGPIGMLLQQGQLPAAQDLMQRLKSIFPGRLYVELQRHPG
EGGQPQAEKATERGHIEMAYAMDLPLVATNDVYFPKTEMYEAHDALICIAEGAYVDQAEG
RRRLTAQHYFKSQQEMVTLFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RQANEGLQDRLAVIPHAVSLEDYQKRLDFELDIIEGMGFPGYFLIVADFIHWAKEQGIPV
GPGRGSGAGSLVAYALTVTDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QQKYGRDRVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKLIPVEGVKPMSIADSLK
EEPRLREEARNEEVVNRLLTYGQQVEGLLRNASTHAAGVVIGDRPIDELVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQSAVDLIKGEGRDLHIAADGSQLYDPPEGGV
NEINAIPLDDIPTYKLYAAAKTVAVFQVESSGMMDALKRMKPNCIEDIVALVALYRPGPM
ENIPTYCEVKNGLKKIESVHPLIDHLLAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAAEMAKERPKFEKGAMENGVPAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMGGVMNCDIHLTDKLAVYFEEVKKGLGLPYVPPCVNRSEATFNVIKGE
LIYALGALKNVGVEAMRLITAARRVDGFERPFATLYDFARRVDLKKVGKRPLEMLARAGG
FDQLDPNRRRVFDSLERLVGYSAAIHEQKNSNQVSLFGEAGDDLPEPRLSGTPDWLPAER
LSEEFKAIGFYLSGHPLDDYMPALKRKGVMTLDEVMEKARRGPFLAKMAGVVAGRQERKS
ARGNRFAFAQLSDTTGGFEVTLFSEALEKSREHLETGAKVVLSAEATMESDQLKLLARSV
GPIDAAVSDAGASSLRVYITEAAAVATVATVLEEARAAAKNANRGEVLMYLQDPTLPGDV
ELDLGQYFPINPQIKGAIKSLDGVLDVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctctccccgattcattcacctgcgcacccataccgaatactccctgttagag
ggggcgttgcggctgaaaaagctatccgatctgtgcaagggcgcagagatgccggccatt
gcggtgaccgataccaacaacatgttcgccgcactggagttttccgtcacgctgtccggc
gcgggcatccagccgatcctgggctgtcaggtggattttacctatcagcaggcggccccg
ggcgagaagccaaggacaccggccccactggttctgctggcacagtccgaggtcggctat
gaaaacctgatgaagctgaactcttgtctgtatctggacaaggggcaccagctgccacag
gtgacactggacgagctgcaacagtattccgctggcttaatttgcctgtccggtggtcct
aacgggccgattggcatgttgctgcaacagggccagctgccagccgcccaggatctgatg
cagcggttgaagtcaatttttccaggtaggctctatgtggagctgcagcgtcaccccggt
gagggcggccagccgcaggcggaaaaggcgacagagcgcggccatatcgagatggcctat
gcgatggatctgccgctggtggccaccaatgatgtctatttccccaagaccgagatgtac
gaggcgcatgacgcgctgatctgtatcgctgagggcgcctatgtggatcaggccgaaggc
cgtcgccgcctgactgcgcaacactatttcaaaagccagcaggaaatggtcaccctgttt
gccgatctgcccgaggcgatcgagaacacggtggagattgccaaacgctgtgccttcatg
gcctatcgccgcgacccgatcctgcccaagtttgccgatgatgaggtcgccgagctgcgc
cgtcaggccaatgaggggctgcaggaccgtctggcggtgatcccccatgcagtcagcctt
gaggactatcagaaacggctggattttgagctcgacatcatcgagggcatgggattccct
ggctatttcctgatcgttgccgactttatccattgggccaaggaacagggcattccggtg
gggccgggccggggctcgggggcggggtcgctggtggcctatgcgctgaccgtgaccgat
cttgacccgctgcgctattccttgctgtttgagcgcttcctgaaccccgagcgggtgtcg
atgcccgactttgacatcgacttttgcatggaccgccgcgaagaggtgatccgctatgtg
cagcagaaatatggccgcgaccgggtcgggcagatcatcaccttcggagcgctgctgtcc
aaggcggcggtgcgtgacattggccgggttttgcagatgccttacgggcaggtggaccgg
ctgtccaaactgatcccggttgaaggcgtcaagccgatgtcgattgccgacagcctgaag
gaagaaccgcgcctgcgcgaagaggcccgcaacgaagaagttgtgaaccggttgctgacc
tatggccaacaggtcgaaggcctgctgcgcaatgcctcgacccacgcggcgggggtggtg
attggcgaccgtccaattgacgagctggtaccgctgtaccaggatccgcgctctgacatg
cccgccactcagttcaacatgaaatgggtggagcaggccgggctggtcaagtttgacttt
ctgggcctgaaaaccctgacggttatccaaagcgcggtggatctgatcaagggcgagggc
cgcgatctgcatatcgccgccgacggcagccagctctatgatccccccgaaggcggggtg
aacgagatcaacgccatcccgctggatgatatccccacctataagctgtacgcggcggcc
aagacggtggcggtgttccaggtggaatccagcggcatgatggatgcgctgaagcggatg
aaacccaactgcatcgaggacatcgtggcgctggtggcgctgtaccgtcccggcccgatg
gagaacattccgacctattgcgaggtcaagaacgggctcaaaaagatcgagtccgtacac
ccgctgatcgaccatctgctggccgaaacccagggcattatcgtctatcaggaacaggtg
atgcagattgcccaggtgatggcgggctattcgctgggtggtgcggatctgctgcgccgc
gctatgggtaagaagatcgccgctgagatggccaaggaacgccccaagttcgaaaaaggc
gcgatggaaaacggcgttccggccaagaaagcctctgaggttttcgatctgctggaaaaa
ttcgccaactacggcttcaacaaaagccacgcggcggcctatgcggtggtgtcctaccag
accggctggctgaaggcgaaccacccggttgagttcatgggcggggtgatgaactgcgat
atccacctcaccgacaagctggcggtctattttgaagaggtcaagaaggggctgggtctg
ccttatgtgccaccctgcgtgaaccgctctgaggcgacgttcaacgtgatcaagggcgag
ctgatctatgcgctgggcgcgctgaaaaatgtcggcgtcgaggcgatgcggctgatcact
gcggcccgccgggttgacggctttgagcggccctttgcgacgctgtatgattttgcccga
agggtggacctgaaaaaggtcggcaagcggcccctggaaatgctggcgcgggcgggtggc
tttgaccagctggaccccaaccgccgccgggtgtttgacagtctggagcggctggtcggc
tattccgccgcgatccacgagcaaaagaactctaaccaggtgtcgctgtttggcgaggcc
ggcgatgatctgccggagcctcggctgtccggcaccccggactggctgccggccgagcgg
ctgagcgaggaattcaaggcgattgggttttacctgtccggccatccgctggacgactat
atgccggcgctgaaacgcaagggggtgatgaccctggacgaggtgatggagaaggcgcgg
cgcggcccgttcctggccaagatggccggggttgttgccgggcggcaggaacgcaaatca
gcgcgcggcaatcgctttgcatttgcccagctgtcggacaccaccggcggctttgaggtg
accttgttttccgaggcgctggagaaaagccgcgaacatctggagaccggtgccaaggtg
gtgctgagtgccgaggccacgatggagagcgatcagctgaaactgctggcccgatccgtc
ggtcccattgacgccgcggtgtcggatgccggagccagcagcctgcgggtctatatcacc
gaggccgctgcggtcgcaaccgtagccacggtgctggaggaggcgcgcgccgccgccaag
aacgccaaccggggtgaagtgctgatgtatctgcaggacccgacattaccgggcgatgtg
gaactggacctgggccagtatttccccatcaacccgcagatcaagggcgccatcaaatcg
ctggacggggtgctggatgttgaggagatctga
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