KEGG   Parasedimentitalea psychrophila: QPJ95_08320
Entry
QPJ95_08320       CDS       T09434                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ppso  Parasedimentitalea psychrophila
Brite
KEGG Orthology (KO) [BR:ppso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppso03032]
    QPJ95_08320
   03036 Chromosome and associated proteins [BR:ppso03036]
    QPJ95_08320
   03400 DNA repair and recombination proteins [BR:ppso03400]
    QPJ95_08320
DNA replication proteins [BR:ppso03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    QPJ95_08320
Chromosome and associated proteins [BR:ppso03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    QPJ95_08320
DNA repair and recombination proteins [BR:ppso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      QPJ95_08320
SSDB
Motif
Pfam: Bac_DNA_binding DUF2267 HU-CCDC81_euk_2 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: WIY26902
UniProt: A0A9Y2L3U7
LinkDB
Position
complement(1727800..1728087)
AA seq 95 aa
MSKPMTKTQLVAALAEDMGSDKKAAGAALEAVCTLITREVSGGGAVTLPGVGKIYCRERP
EREVRNPATGEKFMKEADKVVKMTIAKALKDSVNG
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtccaaaccaatgacaaaaacccagctcgttgccgctctggctgaagacatgggcagt
gataaaaaagccgcaggcgccgctctggaagccgtttgcacactgatcacccgtgaagtt
tccggtgggggtgctgtgacactgcccggtgttggcaaaatctattgccgcgaacgcccc
gagcgcgaagtgcgcaacccggctacaggcgaaaaattcatgaaagaagccgacaaagtg
gtcaaaatgaccatcgccaaagcgctgaaagacagcgtcaacggctaa

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