KEGG   Parasedimentitalea psychrophila: QPJ95_08945
Entry
QPJ95_08945       CDS       T09434                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ppso  Parasedimentitalea psychrophila
Brite
KEGG Orthology (KO) [BR:ppso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppso03016]
    QPJ95_08945 (truB)
Enzymes [BR:ppso01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     QPJ95_08945 (truB)
Transfer RNA biogenesis [BR:ppso03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    QPJ95_08945 (truB)
 Prokaryotic type
    QPJ95_08945 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 DUF4945
Other DBs
NCBI-ProteinID: WIY27023
UniProt: A0A9Y2L2N5
LinkDB
Position
complement(1852732..1853637)
AA seq 301 aa
MARKRKGRDISGWLVVDKPAGITSTSVVNKVRWALEAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYITDALKAYHFTVRLGQATNTDDTEGEVIASSDARPTDDEIIAALPQFLGDIMQ
VPPKFSAVKIDGQRAYKLARDGEDVELAARPLWVEELLLVDRPDADHVTLEMTCGKGGYV
RSIARDLGASLGCHGHVRELRRVWSGPFEVENGLTLARIEEMARTPELDTFIQPLEIGLV
DLPELKCTPEGAAKLRNGNPGMVLAATVEYGDEAWASLDGEAVAVGVYKAGELHPSRVFV
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcacgcaaacgcaaaggccgcgatatttctggttggttggtggtggacaaacccgcc
ggcatcacctcgacctcggtcgtgaacaaggtccgctgggcgcttgaggccaagaaggcc
ggccatgcgggcacccttgatcctgaggcaaccggcgtgctggccgtggctctgggtgag
gcgaccaagacggttccctatatcaccgatgcgctcaaggcctatcacttcaccgtgcgg
ttgggtcaggccaccaatacagacgatactgagggcgaagtgattgccagcagcgatgcg
cgccccacggatgatgaaatcatcgccgcgctgccgcagtttctcggtgacatcatgcag
gtgccgcctaaattctcagcggtgaaaatcgacggtcaacgggcctataaactggcccgc
gacggcgaggatgtggaactggcggcgcggcccttgtgggtcgaggaactgctgctggtg
gatcgccccgacgccgatcacgtgacgctggagatgacctgcggcaagggcggctatgtg
cgctcgatcgctcgcgatctgggcgcctcattgggctgtcacggccatgtgcgcgaattg
cgccgggtctggtcggggccgtttgaggttgaaaacgggctgacccttgcgcggatcgaa
gagatggcccgcaccccagagctggataccttcattcagccgctggaaattggcttggtg
gatctgcccgagctgaaatgcacccccgaaggcgccgccaagctgcgcaacggcaacccc
ggcatggtactggccgccaccgtggagtacggcgacgaggcctgggcctcgctagacggc
gaagccgtcgccgttggcgtctacaaagcgggcgagctgcaccccagccgggtgtttgtg
cgctaa

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