Parasedimentitalea psychrophila: QPJ95_11370
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Entry
QPJ95_11370 CDS
T09434
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ppso
Parasedimentitalea psychrophila
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppso03032
]
QPJ95_11370 (ihfB)
03036 Chromosome and associated proteins [BR:
ppso03036
]
QPJ95_11370 (ihfB)
03400 DNA repair and recombination proteins [BR:
ppso03400
]
QPJ95_11370 (ihfB)
DNA replication proteins [BR:
ppso03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QPJ95_11370 (ihfB)
Chromosome and associated proteins [BR:
ppso03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QPJ95_11370 (ihfB)
DNA repair and recombination proteins [BR:
ppso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QPJ95_11370 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
WIY27452
UniProt:
A0A9Y2P4Z8
LinkDB
All DBs
Position
2335161..2335442
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELIQKIAEENPHLYQRDVERIVNTVFEEVTGAMSRGDRVELRGFGAFSVKKRDSRV
GRNPRTGETVQVDEKHVPFFKTGKLLRDRLNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctcagaattgattcagaagattgcagaagaaaacccgcacctgtatcagcga
gacgttgagcggatcgttaatacggtgtttgaggaagtcactggcgccatgtcgcgcggt
gaccgggtcgaactgcgtgggtttggcgccttttcggtgaaaaagcgtgactcgcgggtg
ggacgcaatcctcgcaccggtgaaacggttcaagtagatgaaaaacacgtcccgttcttt
aagaccggcaagttgctgcgggaccgtttgaacggaaaataa
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