Parasedimentitalea psychrophila: QPJ95_16280
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Entry
QPJ95_16280 CDS
T09434
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ppso
Parasedimentitalea psychrophila
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppso03016
]
QPJ95_16280 (rnd)
Enzymes [BR:
ppso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QPJ95_16280 (rnd)
Transfer RNA biogenesis [BR:
ppso03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QPJ95_16280 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WIY24161
UniProt:
A0A9Y2KVY3
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All DBs
Position
3341022..3342179
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AA seq
385 aa
AA seq
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MKTLTTTEELKEFCLEAAKHPFVTVDTEFLRERTYYSKLCLIQLAFPGEGDENAVLVDPL
SADLALDPLYDLFRDESVVKVFHAARQDLEIFWVDAKVFPKPLFDTQVAAMVCGFGDQAG
YETLVRKIVKESVDKSSRFTDWSRRPLTDAQKTYALADVTHLRVVYQYLAAELEKSGRGH
WVTEELQVLTNPGTYDIQPQDAWQRIKTRTNSSKFLAVVRELAAFREDYAQTNNVPRNRV
FKDDALVELASTKPKTGSDLGASRLLLREARRGAIADGILEAVTIGVNCPADKMPKVDRS
KEKLQVNPALADLLRVLLKSKTENAGVAAKLIAPSADLDAIAAGQRDVAALSGWRLEVFG
ADALRLCDGEIGLAAKGQMVRVVEL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactctgaccaccaccgaagagcttaaagagttttgcttagaagctgcaaaacat
ccctttgtgacggtggataccgagtttctgcgcgagcgaacttactattccaagctctgc
ttgatacagctggcctttcccggcgaaggggatgaaaatgcggtgctggtggacccgctg
tctgccgatctggcgcttgatccgctgtatgatctgtttcgcgatgaatcggtggtcaag
gtgttccatgccgcgcgccaggatctggagattttctgggtagacgccaaagtcttcccc
aaaccgctgttcgacacccaggtggcggcaatggtctgtggcttcggcgatcaggccggg
tatgaaactctggtccgcaagatcgtgaaagagagtgtcgacaaaagctctcgctttacc
gactggtcgcggcgtccgctaaccgatgctcaaaagacctatgcgctggcggatgtgacc
catctgcgcgtcgtttatcagtatttggctgccgagctggagaagagcgggcggggccat
tgggtcaccgaagagctgcaggtgctgaccaatcccggcacctatgacattcagccgcag
gacgcctggcagcgcattaaaacccgtaccaactcgtccaagtttctggccgtggtgcgt
gagttggccgcctttcgtgaggattacgcccagaccaacaatgtgccgcgcaaccgggtg
ttcaaggatgacgcgctggtcgagctggcctcgaccaagccaaagacgggatctgatctg
ggggcgtcacggctattgctgcgcgaggcccgccgcggtgccatcgccgacggtatcctt
gaagccgtcaccattggggtgaactgtccggcggataaaatgccaaaagtggatcgcagt
aaggaaaagctgcaagtcaatccggccctggccgacctgttacgagtgttgttgaaatct
aaaactgaaaacgccggtgtggccgcaaaactgattgcgccaagcgctgatctggacgcc
attgccgccggacaacgcgatgttgctgccctgtcgggctggcggttagaggtttttggc
gcagatgctctcaggctttgtgatggcgagatcggcctggcggccaaaggtcagatggtc
cgggttgtcgaactctga
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