Parasedimentitalea psychrophila: QPJ95_16615
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Entry
QPJ95_16615 CDS
T09434
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
ppso
Parasedimentitalea psychrophila
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
WIY24210
UniProt:
A0A9Y2P622
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Position
complement(3407664..3412202)
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AA seq
1512 aa
AA seq
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MTERPAFRQQANHSCVEAASFSASDLLELRQYQNGIRFLLGTTALIAVLSVMAPEAQAQQ
YWDGTDTTSGNGAPTGGSGTWDGATTNWTDDAVGTTNQSWASGDAVFGGTAGTITVSGTQ
TTTGMTFDTGGYTVTGGTLAVGGATIDGGSGATTISSTLTGAGLNKVGTGTLTISGTTNI
TGRFKVAEGGVVLGVGAFDDPLSSIWLQDDIDPVGSQVTLDLGGNTVATTTLVVNGVGTT
ELSNGTVEFSGTADIWYATVSADLTGSGSLVKSGSGTATLEGTNTYTGSTLVRQRTLSLA
AGSSIASTTVTIGDASTTAKPILIAETGTLATGTDLTINTGAGLGGEFRNERDNSITTLN
TSDADAEVTLNGGTLTITGGGTVAGVVAGAANLTNNGGTLTLTGTANTATGTLTNTSGIV
NLADWSGSINNSATTNFTGSMTLGGTVTNNSGASLNNESGAAIVVGGVTTFTSAGTVTGA
TGLTFNATNVTYQDGHTEAGTVDINVATGGTLTEERTGDQNFSGSVDYNVVTGGAANFTA
TSGFTTTGTLTHGSSGTFTVANNQTVSAATINLNSGTAIIGDGATLQGTGNTMNIAVATA
AGAGATLTDANDINILAAGSATYAGAGTLSVNTDGAGAEGITIDGALNVTGGGTVTTTVG
GTGTIVTQGTGTIDVSNAGSHLDATGETITNNSTAATGINVGAGSQLTAANITNGTGATL
SNAGTVTANVSNTTATSTLTTSDTITGDVTNTLGTVNAAGVISGTVTQNSGTFTLTAALS
AGALSGAGDITNGGSLLTLDGDADATGETATYSGAISGTGGLTINVGEDTQVLSGANTYS
GTTTITSGTLELSGGSAIADTGEIANAGTLLVSTAETVGALNGAGAVTLSATLTTGDAGD
DTISGNITGAGGLTKAGAGTLTLSGTNDYTGTTTVSAGTLELSGGSAIVDMGEIANAGTL
LVSTAETVGALNGAGGVTLNSTLTTGDAGNDTISGVISGSGGLTKQGSGNLILSGVNTYS
GATTVSSGHLQIDQSLTGGAVVNAGAFLTNNGTIAGTVTNNGTVTSASAIFGGLTNSSTF
NASGSTVVNGPFSNSGTASMLNGATGDTITVNGNMSGGGQLNLDVNYATNTGDSLLVNGS
TSGVTTVSLNSLTTDNPAIGSELTVVTVTGTTNASDFVLAGGPLVAGIYSYDLALASGEW
ALSGQLNAVGEAYETAPIALGELLYMPTLEQRRGQARNLAASDEGKSLVGGSWGRVFANK
FESELGSSTNGTAVDANISGFQAGYDYVVPDGQNGTWVLGLTGQVGTVGSTTPNSTSDAK
SLALGATATWFGNDGWYADGQLQFSFLEINFSADGTDLAENEKGYGVGLSAEFGKRITLS
SSSAIVPHAQINWTRLDGGTFTDLSGNSVSMENIQSKRGRLGLAYEYFDQPNNTKLYAVG
SIVHGFSSNNTVVINDASLKIGELGTWAEFGVGVSKYWGVNRKFYAEMSSRQSLNSESGS
SFGITAGIEFKL
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagaccagcatttcgacagcaggccaatcattcatgtgttgaggcggcaagt
ttttcagcttccgaccttctggaactccgccagtatcaaaatggtattaggtttctgctt
ggcacaactgcattgattgcggttctgtctgtgatggcgccagaggcgcaggcgcagcag
tattgggatggtacggatacgacctctggcaacggggctcccactggcggcagcgggact
tgggatggcgcaacaaccaattggaccgatgatgccgttggtacaaccaaccagtcctgg
gccagcggtgatgccgtgttcggcggcacggcaggtacaattaccgtttcgggcacacag
acaacaacaggaatgacgtttgacaccggtggttacacggtaaccggcggcacactggcg
gtcgggggcgcaaccattgacggtggctctggtgcgacgaccatttcatcgaccctgaca
ggtgccggactaaataaggtcggcaccggcacacttaccatttccggaaccaccaatatt
accggcagatttaaagttgcagaaggtggcgtggttttgggggtgggcgcttttgacgat
ccgttgtcatctatttggcttcaggatgatatcgaccccgtaggcagccaagtaacgctt
gatctgggtggcaatacggtcgccacaacaacccttgttgtaaacggcgtgggcacgacc
gagctcagcaatggcaccgtggagttttccggcactgctgatatatggtatgcaacggtc
agtgcggatctcaccggcagcgggtctctcgtaaaatcgggttcggggacggccacactg
gaaggtacaaatacctataccggtagcactttagtgcgccaacgaacgctatcgctggcg
gcgggatcttcaattgcttctacaactgtgaccattggggacgcgagtacaacggcgaaa
cctattttgattgcggagactggtacactggccaccggcacagatctgaccataaacacg
ggcgcagggctcggcggcgaatttcgcaatgagcgtgataacagcatcactactttgaat
acaagtgatgcggatgctgaggtcacgctgaatggcggaacactgacgataaccggcggt
ggaaccgtggctggtgtggttgcaggggctgccaacctgaccaacaatggcggtacgctg
acacttaccggcacagccaacaccgcaaccggaacactgaccaacacatccggcatagtg
aatctggccgattggtccggaagcatcaacaacagcgcaacaacaaatttcaccggcagc
atgacactgggtgggactgtcacaaataacagcggcgcatcgctgaataatgagtcgggt
gcagctatcgtggttggcggggtcacgacattcaccagcgcaggcacagttaccggtgcc
acaggcctgacgttcaacgcaacaaatgtcacttatcaggacggccataccgaagctggt
accgttgacatcaatgtggcaactggcggcaccctgaccgaagagcgtactggcgaccaa
aacttcagcggcagtgttgattataatgttgtcaccgggggggctgcgaatttcactgcc
acctctggatttaccacaacgggcacgctgacccatggcagttccggcacttttaccgtg
gcgaataatcagacagtgtcagctgctaccatcaacttgaattccggaacggccatcatt
ggtgatggtgcaactctgcagggtaccggcaatactatgaatatagccgtcgccacagca
gcaggggccggagccacactgacagacgccaatgacatcaatatcttggccgcgggcagc
gccacctatgccggggccggaaccctgtctgtcaataccgacggcgccggggccgaaggg
attaccattgacggcgcactgaacgtgactggtgggggaaccgtcactacgacggttggg
ggcacaggcaccattgttacccagggcactggaacgattgatgtgtccaacgccggttcg
catctggatgccaccggagaaaccattaccaacaacagcaccgctgcaacgggtatcaat
gtaggtgctgggtcgcagttgacggctgccaacattaccaatggcactggcgctacattg
tcaaacgctgggacagtcaccgcgaatgtatcgaacacaacagcaaccagcaccctgacc
acatccgataccatcaccggagatgtgaccaatacacttggcactgtgaatgcggcaggc
gtaatttccgggacagtgacccagaacagcggaaccttcaccttgaccgctgccctatca
gccggggccctgagcggcgctggagatatcaccaacggtggatctttactgacacttgat
ggcgatgcggacgcaacaggtgagacggcaacctatagtggggcaatatccgggactggc
ggcctgactattaacgtcggtgaggatacccaagttctgtcgggcgcgaacacctattcc
gggaccacaacgatcacgagcggcacactggagctgtccggcggatccgcaattgcggac
acaggtgagattgccaatgcgggcacgctgctggtcagtacggcggaaaccgtcggcgcg
ctgaatggcgcgggcgcggtaacgctgagcgcaacactgaccaccggagacgccggagat
gacacgatttctgggaatatcacgggtgctggcggactgacaaaggctggcgccgggacg
ctcacactatcagggacaaatgactacaccggcacaacgaccgttagtgcaggaacgcta
gaactgtcaggcgggtctgcgattgtcgacatgggtgagattgccaacgcaggcacattg
ctagtgtccacggcggaaaccgtcggcgcgctgaatggcgcaggcggagtgacactgaac
tcaacgctgacaactggagatgccgggaatgacacaatatcgggggttatttccggcagc
ggtggcctaaccaagcaagggtccggcaacttgatattgtccggtgtaaatacttactcc
ggagcaacaacagtgtcttctggtcatttgcaaattgatcaatccctaaccggtggcgca
gtcgtaaacgcaggcgcatttctgaccaacaatggcacgatcgcaggcacggttaccaac
aacggaacggttacatccgcgagtgccattttcggaggacttacaaatagctccacgttt
aatgcgtccgggtcgaccgtcgtaaatggtcccttctccaactcgggaactgcctcgatg
ctaaatggcgcgaccggagatacaattacggtcaatgggaatatgtcgggtggagggcag
ctgaatctggatgtcaattacgccacaaacacaggagattccctcttggtaaatggctcc
acctctggggttactactgtgtcactaaatagcctgaccacggacaatccagccatagga
agtgaactgacggttgtaacggttactggcactacaaatgcaagtgactttgttctggca
ggtggtcccttggttgccggtatctattcttatgacttggccttagcgagcggtgaatgg
gcactgagtggccagcttaacgcggtgggggaggcatatgagactgcaccaattgcattg
ggggaactcttatacatgcccacgttggaacagcgtcgaggccaagcgagaaatttggct
gcgtctgacgaagggaaaagcttggtcggtggttcttgggggcgtgtgtttgctaataaa
tttgaatcggaattaggttccagcacaaatgggactgccgtcgacgccaatataagcggc
tttcaggccggttatgactatgttgttcccgacggtcaaaatggaacttgggtattaggt
ctcacgggacaagttggaacagttggcagcacgacgcctaactccaccagtgatgcaaag
agcttggcactaggtgcaacggcaacctggtttgggaatgatgggtggtacgctgacgga
caattacaattcagcttcctcgaaatcaatttctcggcagacggcaccgatctggcggaa
aatgaaaagggttatggagttgggctcagtgccgaattcgggaaaaggatcactctatct
tcttccagtgcaattgttcctcatgctcagatcaactggacacgacttgatggtggcact
tttactgaccttagcggcaattcggtttcaatggaaaacatccaatcaaagcgaggccga
ttggggctagcttacgaatactttgaccagcccaacaacaccaagctctatgcggtgggg
agtattgtccatggcttctcaagcaacaacactgttgttatcaatgatgcttccctgaaa
attggcgaattagggacgtgggcagaatttggcgtcggcgtatcgaaatactggggggta
aacagaaaattctacgcagaaatgtcctctcgccaatctctaaacagcgaaagcgggtcc
agttttggtatcactgctggaatagaatttaagttgtag
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