Podospora pseudopauciseta: QC763_0108420
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Entry
QC763_0108420 CDS
T09815
Symbol
TOP3_1
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03440
Homologous recombination
ppsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC763_0108420 (TOP3_1)
03460 Fanconi anemia pathway
QC763_0108420 (TOP3_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsp03032
]
QC763_0108420 (TOP3_1)
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_0108420 (TOP3_1)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QC763_0108420 (TOP3_1)
DNA replication proteins [BR:
ppsp03032
]
Eukaryotic type
DNA Topoisomerases
QC763_0108420 (TOP3_1)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
QC763_0108420 (TOP3_1)
FA (Fanconi anemia) pathway
QC763_0108420 (TOP3_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
87926731
NCBI-ProteinID:
XP_062761928
LinkDB
All DBs
Position
7
Genome browser
AA seq
660 aa
AA seq
DB search
MEGTRKGLYVQVGVLSRLSSHRDSVVRAHHIYNLKKSRFGVSSNIQSHVANCSSALFFFF
FSTHSPSLAKSTAKTTKPTSTKTTKSSPTSSTKISKASTKTSSAKTEQPTIDTKPNNIMT
RVLCVAEKPSIAKAVAQHLSGGQYQTANTSDKYTKNYSFTFNFGPGLGDSNVTMTAVRGH
LTTAEFPHLQILGEHIGSEIRDAALKGNRNIQVRRARFSNVERGHILSAARRLVALDQRQ
VDAVAARIELDLRIGFAFTRFLTNNLRGLGGPMGELMISYGSCQFPTLGFVVDRYFRVKN
FVPEAFWSIKLVHEREGMKVSFGWARNRLFDRAAVTILYERCLRAREAVVKKVQEKPTKK
WKPLPLTTVELQKMATRFLRMTGQQAMTVAEKLYNKGFISYPRTETDRFDKGMNLRGLVE
KQFPDGRWGAFARELIEGGRFNQPRQGKNDDKAHPPIHPITYAAPTVLDEQERKVYEFVV
RRFLACCSDDAKGMATDVEVGYGEEMFAAHGVIVLERNYLDVYPYENWTGTAMLPKFEVG
ERFEPTEAMMTEGKTSPPSYLTEADLIALMDANGIGTDATMAEHIEKIQERQYVVTVPRG
GGGGAGGAEEDNEPPPAAGRGRGRGRGRGGRAARGGRGGARGGGAEGGGVMVSRSLSRPV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcacgaggaagggcttatacgtgcaggttggagtcttgagcaggctttcctct
catcgcgactcggttgtgagagcacatcatatctacaatttgaagaagtctagatttgga
gtctcatccaacattcaatctcatgttgccaattgcagctctgctctcttcttcttcttc
ttctccactcactctccttcactagcaaagtccacggcaaaaactacgaaaccaacttca
accaaaacaaccaaatcgtcaccaacttcatcgactaagatatcgaaggcttccaccaag
acctcatcagcaaaaactgagcaaccaaccatcgacacaaaacccaacaacatcatgaca
cgcgtcctctgcgtggctgaaaagccctccatcgccaaagcagtcgcccaacacctctcc
ggaggccaatatcaaaccgcgaacacctcagacaaatacaccaaaaactattccttcacc
ttcaacttcggccccggcctgggcgactccaacgtaaccatgaccgccgtccgcggccac
cttaccaccgccgaattcccccacctacaaatcctgggggagcacatcggctccgaaatc
cgcgacgccgcgctcaaggggaacaggaacatccaggtcaggcgagcgcggttttcaaac
gtggagagggggcacatactcagcgcggcgaggaggttggtggcgttggatcagcggcag
gttgatgccgtggcggcgaggattgagctggatttgaggatcgggtttgctttcacaagg
ttcttgacgaataacctgcgggggctggggggtccgatgggggagttgatgatcagttat
gggtcttgtcagtttcccactctggggtttgtcgtcgatcggtactttcgggtcaagaat
tttgttcccgaggcgttttggagtatcaagcttgttcacgagagggaggggatgaaggtg
agctttggctgggcgcggaatcgactgtttgatcgggcggcggtgacgattctgtatgaa
cgctgcctgagggcgagggaggcggtggtgaaaaaggttcaggagaagcccaccaaaaag
tggaagcctctcccgcttacgacggtggaattacaaaaaatggcgacgaggtttttgagg
atgacgggtcagcaggctatgacggtggcggagaagctgtacaacaaggggtttatctct
tatccgaggacggagacggacaggtttgacaaggggatgaacctgagggggttggtcgag
aagcagtttcctgatgggaggtggggagctttcgcgagggagttgattgagggggggagg
ttcaaccagccgaggcaggggaagaacgatgataaggctcatccgcctatccaccctatc
acctacgcggcgccgacggtgctggatgagcaggagagaaaggtgtatgagtttgtggtg
aggaggtttttggcttgttgctcggatgatgccaaggggatggcgacggatgtggaggtg
gggtatggggaggagatgtttgctgcgcatggggttattgtgctggagaggaattatctg
gatgtgtacccctacgaaaactggacggggacggctatgttgcccaagtttgaggtgggg
gagaggtttgagccgaccgaggccatgatgacggaggggaagacgagccccccgagttac
ttgaccgaggcggatctgattgcgttgatggatgcgaatgggattgggacggatgccacg
atggcggagcacattgagaagattcaggagaggcaatatgtggttacggtgccgaggggg
ggagggggaggagctggtggtgccgaggaagataatgagcctcctcctgctgctgggcga
ggccgtgggagaggaagggggaggggtggacgagctgctcgtggcgggagaggaggggcg
agaggcggtggggctgagggagggggggtgatggtgtcaaggagtttatcccgaccagtc
tag
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