Podospora pseudopauciseta: QC763_104090
Help
Entry
QC763_104090 CDS
T09815
Symbol
YTH1
Name
(RefSeq) RNA-binding component of cleavage and polyadenylation factor
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
QC763_104090 (YTH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsp03021
]
QC763_104090 (YTH1)
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_104090 (YTH1)
Transcription machinery [BR:
ppsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
QC763_104090 (YTH1)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
QC763_104090 (YTH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
87927323
NCBI-ProteinID:
XP_062769881
LinkDB
All DBs
Position
1:1554137..1554904
Genome browser
AA seq
255 aa
AA seq
DB search
MAFLPPPAKQLLTHTPTPYTFTFTPFLQKTYQHSLPPPSSNLSSGDQQQSQPNNNNTGGF
GSLVCKHWLRGLCKKGLTCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSKLP
PCPHYDRGFCPLGPKCDKRHLKRNICLYYLAGFCPDGKQCRQGAHPRWTRDELMEKPTMK
VEKTAEELEREEQERERHRERERERDMERRAERDRERGGDGDRHDRGHDKGGRFGRGGRG
RWGGKRGGYRGRGGH
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcctcccgcccccagccaaacaactcctaacccacacacccaccccctacacc
ttcaccttcacccccttcctccaaaaaacctaccaacactccctccccccacccagcagc
aacctctcctcaggcgaccaacaacaatcccaacccaacaacaacaacaccggcggcttc
ggttccctagtctgcaaacactggctccgcggcctctgcaaaaagggcctaacctgcgag
ttcctccacgagtacaacctccgcaagatgcccgaatgcaacttcttcgtccgcaacggc
tactgctccaacggggacgagtgcctctacctccacatcgatccctcttccaaacttccc
ccctgcccccactacgaccgcgggttttgccccttggggccaaaatgcgacaagagacat
ttaaagagaaacatatgtctttactacctcgcggggttctgcccggacgggaagcagtgc
aggcagggggcgcatccaaggtggacgagggatgagctgatggagaagcctactatgaag
gtggagaagacggcggaggagctggagcgggaggagcaggagagggagaggcatagggag
cgggagagggagagggatatggaacggcgggcggagagggatagggagcggggtggggat
ggggataggcatgatagggggcatgacaaggggggcaggtttgggaggggggggaggggg
aggtggggtgggaagaggggggggtatagagggagagggggtcactag
DBGET
integrated database retrieval system
