Podospora pseudopauciseta: QC763_104630
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Entry
QC763_104630 CDS
T09815
Symbol
UTP20
Name
(RefSeq) U3 snoRNP protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsp03009
]
QC763_104630 (UTP20)
Ribosome biogenesis [BR:
ppsp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
QC763_104630 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TPR_CAND1
HEAT_MROH2B_C
HEAT_GCN1_C
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
87927376
NCBI-ProteinID:
XP_062769940
LinkDB
All DBs
Position
1:complement(1725620..1733693)
Genome browser
AA seq
2619 aa
AA seq
DB search
MPSTTSGRIVKSQRGVKRTPHEKNHRWESFSTKISKLHSLDPLRKVRRHDLEAEDLEAST
SYLRNGLDRWAELNLSKTYVSFRLKVTRYTDSLAQILHHEDKIMDLLAEAISTHQKDSLE
PLLDLVTAFAHDLGVRFEKHYPRALGLIVELASKVHDVEAIEWTFASLAFLFKYLSRLVV
PDLRPTYDAVSPLMGKAKIPGHIARFAAEAMSFLVKKAAAPSHKEKALPLFVEHVRKDLE
SVAGTRQYELYSQGIMTMFAEALKAPNNGVHSTAPEVFATIVRDVPEGEADLPEQTVWTD
VCCGVLTSIIHHTTIETFKTIETRIVQEATAGTRPVLFVQLLGVAAGVRRGNRIHDWSAL
VKALGQQLTQLGEVKERIEAISPRQVWDRLITRIAIIWGQAPIDALLPSLSTLNNTTTKE
PLMRWYIPFCSYLADLHPERFRGLFLKDFQKFVVAHWSRNSNEEMLCVLLPHMVENGGLP
RVKGKDGFLLPQSWQDQIVNKFVRLEDTPFPESGGFGRDAETWRDRCLPKYSALLRVLEV
TTVHPSTNARIAEVLLKKLKLALRPSSSLPTDEANFIMSDGFRAYLRMCAAPGSVDPSLA
PLLRAATPRFCHSPAFLEALLSYLMEIKAKGRSSSETSSGSDSMQEEEDPLVKSLVNNLS
APSHELRLASLRILEILESTPDSNSALATMLQCEELSLILENVRTIAVHVRKLGQIYAHL
DQTSWLIRAIPAFLFGMMTVPLAPVWDDSVEAMKKVAESKHGEEVLADLAFDWLDQPSER
WSGASKPQDPRRLPLTDFECLNMKGLHRTAEPIAQALEEPYRGMLEKFEEGQKIVDPHSQ
RARSMALKALNAIPSLAEKRSRNLVPYLFSFMSDGETPAEDQEDTEEEAEEMLEASWSLP
DRKALVGVFSQFNNPRVLYQADKVYTALLKLLANGDIEVQKLALKAILAWKNDAVKKKQE
HLEYLLDEARFKNELTVLFQGDNKIQPNEREAVMPVLLHLLYGRTISKKGAGSGRHGLHA
TRLAVIRQLNVDDMGNFLDIALGPLRNIRVVDAKGLNERLFSQEILPIRKQVGLLNMLEA
VITELGGAVSPYVESLANAILLCLISACRQVGVTTGEEESEETEETENVKDALLLKVIRT
ISLKCLCKLFQNEQSFDWTPYQDIMVKEIISPRIEKLAVETTQGVSATWKLLGTWAALPK
TAMFLAIDSRIMPNVVETLGMEKAKADVKIYALEMIKTLVGLAQASAQESEFNELIRAEL
LDPNVDLILGKISSLLRDQRDISRDLLGSAVDTVVVLSPIVETSTSIQDIVEISTFLLNQ
PSRMVSPKIKGSILLILKGFMALEDFQGNTELKSKVYHTVASLFGYFKDRQNRQTLAEVL
AVFASTETWAQEIADTCRDLNAYKPRRLDEPDYNVRLTAFNSITRDRETPFTLDQWMPLL
HNMLFYIQQDEEFGVLSTNSADGLCKFIWAAKDAWGSAQQQAFITVVSDILLPAIYAGSK
EESETVRREILRVFGALVAGLPEWEMVSDLTPLVPSSEDSDQAFFFHVLSPAVARQLQAL
RLLESVNAKTPLRSKHISQFFIPLFEHFIFGHPEGGDDHGLGAQAITTVSGLTLSLEWQQ
YRAILRRFVSFVESKPDSQKRVIRLLEREVDALRTALDQKSSDAMEVDGEVQKCRLASTL
PDQEKLSTEIVGSFLPPLLKYIHEKDETEVSSRVPVGVIIAKLLVLLPDNLLNEKLPGVL
TDICHILRSKSVESRDMARDTLAKISGVLGAHRFGFILKELRGALVRGNQLHILSYTMHS
LLLVAIPAFEQGDLDYCLPQIMAVIMDDIFGATGQEKDAEGYTGKMKEVKGSKSQDSMEL
VAKTASIRRLSDLTMPLQSLLLEKLDVRTVRKIDELLTRITKGLLENPAAASQDVLIFCY
EVIQEVYKSNHPMEQPKMDPRLKRYIVQKAAKKSDGGVTAKHTYKLVRFAIDVLRTVFRK
HDHLRTAANIAKLLPIFGDAVLSAEEDVKIAAFKILTVIVKVPFKNDDSANLYKVALKEA
TKAISMSPTTTSDLAQAALKLISVILRDRREIVIKDAALDMLLGKLKDDLTEPLYRHVTF
NFLRSVLDRKMETAVVYDTLDYVGTIMITNPDKDTRDLARGAFFQFLRDYPQKRNRWEKQ
LQFIVANLKYEREGGRISVMEVINLLLKKSVDEFAQEVVATCFVPLIFVLANDDSEKCRL
SAGELLKESFRVADKERLSKFMQLLRTWIQQDDKPAVSKLALHAWGLYFEGREPNVNDKK
DLALVVDRITQVLGDDDALEADWELANTALNTLQTLVIKHPQKALAPSTSELWTEVQTCL
AHSNTTVKLTATRLLSMYLTDFAKTSGRDAKLPLKGSYGLELDEDDVTALVRLSLGILNV
VELDETLAQEIAQVLQFLGGYLESGKTEQEDSDEEEDEDEEDKVDKSVSRKADMKYLFWK
LCSIVRKERQPKPEAMVSKLAAMDLLEAFCIKSPKETVEVSVRTILRPLRNLTDPSIRAP
FSLNELFKTRYEALKSKAVAVMEVLQRKLGSAEYTKALLEVGDQIRERRQARLSKRRIEA
VAAPERYGREKRKKFEKKKERRKIKGQEQRDARRAFQGN
NT seq
7860 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccacaacttccggacgcattgttaagtcccaaagaggcgtcaagcggacgcct
cacgaaaagaatcacagatgggaatcattcagtaccaaaatctcaaagctccattcgctc
gatccgttgcgcaaagtgcgccgccatgacctcgaagccgaagatctcgaagcgagtacc
tcctacctcagaaatggcctcgacagatgggccgaactcaacctgtcaaagacctatgtg
tctttcaggctaaaagtcacccgttataccgattccctcgctcaaattcttcatcatgaa
gacaagattatggacctcttggccgaggccatctcgacgcaccaaaaggattctttagag
ccgttactcgacctggtcactgcgttcgcccatgatcttggtgtgcgattcgagaaacac
tacccccgcgctctcggcttgatcgtggagctggcgagcaaagttcacgatgtagaagca
atcgaatggacctttgcgtcgctcgcattcctcttcaaatatctttcgagactagtcgtt
cctgacctccgacccacatacgatgcggtctctcctttgatgggcaaggcgaagattccg
ggacatattgctcggtttgcggccgaggcaatgagcttcttggtgaagaaagcggcggcg
cccagccacaaggagaaggctctaccgctctttgtggagcatgtgaggaaggatctggag
agtgtggccgggacgaggcagtatgagctctatagccagggtatcatgactatgtttgcc
gaggcgctcaaggctcccaacaatggcgtccattcgactgccccggaggtctttgcaact
atcgtgcgggatgtgccagaaggggaagctgaccttcctgagcaaacagtatggacggat
gtctgctgcggtgtgcttaccagtatcattcaccatacaacaatcgagactttcaagacg
atcgagacacgcatagtgcaagaggctacggctggtacacgcccagtgttatttgtgcag
ctcctaggtgttgcggctggtgtacggaggggaaaccggattcacgactggtcagctctt
gtaaaagctctgggacaacagctcacgcagctgggtgaggtcaaggaaaggattgaggcc
atctcgcctcgccaagtatgggaccgcctaatcaccaggatagctattatttgggggcaa
gcaccaatagacgctttgttgccatcattatcaacactcaacaacaccacgaccaaggag
ccattaatgcgctggtacattccattttgctcctatctggccgatctccaccctgaacgg
ttcagagggctcttcctgaaagactttcaaaaatttgtcgtcgcccattggtcccgaaac
tcaaacgaggagatgctttgcgtgcttctgcctcatatggtagaaaatgggggcctgccg
cgggtcaaagggaaagacggcttccttctcccacaatcctggcaagatcagattgtcaac
aagtttgtacggcttgaagacacccctttcccggagagcggtggttttgggagagatgcg
gagacgtggagggacagatgtctgccaaaatattcagcacttttacgggtgctggaggtt
acgacagtccatccctccaccaatgcccgtatcgccgaggttttgcttaagaagctaaag
ctcgccttacggccctcctcctctttaccaaccgatgaggccaactttattatgagcgat
ggcttccgtgcctatctcagaatgtgtgctgcccctgggtcggtagatccaagtctggct
cctcttctcagagcagctaccccgcggttctgccactctccggcattcctcgaggccctg
ctctcgtatctgatggagatcaaggcgaagggacgcagcagctcagaaaccagcagtggg
agtgacagcatgcaggaggaggaagacccattagtgaagtctctcgtcaacaacttgtcc
gcgccctctcatgaactccggcttgcgtccttgcgaattctggaaattctggagtcaacc
cctgattccaactcagccttagcaacgatgcttcagtgtgaagagctgtctctgattttg
gaaaacgtacgaacgatcgctgttcacgttcgaaaactgggacaaatctacgctcatctt
gatcaaacttcctggctcatacgggcaatcccagccttcttgtttggtatgatgaccgtc
cctcttgctccagtttgggatgactcggtggaagccatgaaaaaagttgccgagtctaag
catggcgaggaggttttggccgatttggcctttgactggttggaccagccttccgaacgg
tggtcaggtgcatccaagccccaggatccacgtcgcctcccgctcaccgactttgaatgc
ctgaacatgaaaggcctgcatagaactgctgagccaatcgctcaggccttggaggagccg
tacaggggcatgctggaaaagttcgaggagggtcagaagatcgttgatccccactcgcaa
agggctcgcagcatggctctcaaagctttgaacgctatcccgagcttggctgagaaacgc
tcaagaaacctagtgccatatctattttctttcatgagcgatggcgagaccccggctgaa
gaccaagaagacaccgaggaagaggctgaagaaatgttagaagcgagttggtcgcttcct
gaccggaaagccttagttggggtgttttcacagttcaacaatcctcgagtgctttatcaa
gctgacaaggtctatacggcacttctgaagctcttggcaaatggtgatatcgaggtgcaa
aagcttgccttgaaggccattttggcatggaagaatgatgcggtcaagaagaagcaggag
catctggagtacctccttgatgaggccaggtttaaaaacgagcttactgtccttttccaa
ggcgacaacaagatccagccaaacgagcgagaggccgttatgcctgttctgcttcacctc
ttgtacggccgtacgatctccaagaagggcgcaggcagtggccggcacggtcttcatgcg
acacgtttggcagttattcggcagcttaatgtggacgacatgggcaacttcctggacatt
gcgcttggcccactgcgcaacatccgtgtcgttgatgccaaggggctgaatgaacggctc
ttctctcaggaaatcctgcccattcgcaagcaggtcggtctgctcaatatgcttgaggct
gtcatcactgagctcggcggtgcggtctccccatacgtggagtcccttgccaatgcaatt
ctcctctgtctcatctccgcctgccggcaggttggtgttacgacaggggaggaagagtcc
gaggaaaccgaagaaactgagaacgtgaaggatgctttgctcttgaaggttatcaggacg
atttctctcaagtgcctctgcaagctcttccagaatgagcaaagctttgactggacgccg
tatcaagacattatggtgaaagaaatcatcagtcctcggatagagaagcttgccgttgag
actacccagggcgtatcagctacttggaagctgctcggtacctgggctgctctccccaag
acagccatgtttttggccatcgacagccgcattatgcccaatgtcgtggagacgcttggt
atggaaaaggccaaggctgatgtcaagatatacgcgcttgaaatgatcaagacccttgtc
ggccttgctcaggcatctgcgcaggagtcagagttcaatgaactcataagagctgagctc
ttagatccaaatgtcgacctcattctcggaaaaataagcagtcttcttcgtgaccagcgc
gatattagcagagaccttttgggttctgctgttgataccgttgttgtactctctcctatc
gtcgagacatccaccagcatccaggatatagtggagatttccaccttcttgctcaaccaa
ccctcgcggatggtcagccccaagatcaaaggttcaatcctgctgattcttaagggtttc
atggctttggaagatttccaggggaatactgaactgaagagcaaggtctatcatacggtg
gcctctttgtttggctatttcaaggacaggcaaaacaggcagaccttggctgaagtgctt
gcagtgtttgcatccacagaaacatgggcacaagagattgcggatacctgccgcgatctc
aatgcttacaagccaaggcgtctggatgagccagactacaatgtccggttgaccgcattc
aactccatcaccagagatcgggagacgccctttactctggaccaatggatgcctctcctt
cacaacatgctcttctacatccagcaggatgaggaatttggtgtcctgtcgacaaactct
gccgatgggttgtgcaagtttatctgggcagccaaggatgcttggggcagcgcccagcaa
caagccttcatcactgtggtttctgatatcctgcttccagccatctacgctggatcaaag
gaggagtcagagactgtgagacgcgagattctacgcgtgtttggtgccctcgtggctggc
ctcccagaatgggagatggtctccgatctgacgcccctggttccttcgtccgaggactca
gaccaagccttcttcttccacgtcctcagtccggctgtcgcaaggcagttgcaggccctt
cgcttgctggagtcggtgaatgccaagacacctctccgcagcaagcacatcagccagttt
ttcattcccctctttgagcacttcatctttggtcatccagaaggtggcgacgatcatggc
ctcggcgcgcaggccattaccactgtttctggcctgaccctttctttggaatggcaacaa
tacagagctattctcagacgattcgtctcgtttgtggagtcaaagcctgactcccagaag
cgagtcatccgtcttctggagagggaggtggacgccctccgcactgcccttgaccagaag
tcaagtgacgctatggaggtggatggagaggtacaaaagtgccgcctcgcgagcacactt
cctgaccaggagaagctcagcaccgagattgtcggcagcttcctgcctcccctcctcaag
tacatccacgagaaggatgagacggaggtcagctccagagtaccggtgggcgttatcatt
gccaagctgctcgtccttctcccggataacctcttgaacgagaagctccccggtgtcttg
actgatatttgccatatcctcaggagtaagtctgtcgaatcccgcgatatggctagagac
acgctcgccaagatctccggtgtcctcggtgctcacaggttcgggttcattctgaaggag
ttgcgtggtgctctcgtcagaggcaaccagcttcatattttgtcctacaccatgcactct
ctgttgttggtcgctatcccagctttcgagcagggtgatctcgattactgcctgcctcag
atcatggctgtcatcatggacgatatcttcggtgccacaggtcaagagaaggatgccgaa
ggttacactggcaagatgaaggaggtcaagggcagcaagagtcaggattccatggagttg
gtcgccaagacagcctccatccgtcgccttagcgatctgactatgcctctccagtctttg
ctgttggagaagctggacgtccgtaccgtccgcaagattgatgagctgctgactcgtatc
accaagggtcttcttgaaaaccctgctgccgcttcgcaagatgtcctgatcttctgctat
gaggtcattcaggaggtctacaagtctaaccatcccatggagcaacctaagatggacccc
cgtctcaagagatatatcgtgcagaaggctgcgaagaagagcgatggcggtgtcacggct
aagcacacctacaagcttgtcaggtttgccatcgatgttctccgaactgtgttcagaaag
catgaccacctccgtactgctgccaatatcgccaagttgctgcccatctttggtgatgct
gtactttccgcggaagaggatgtcaagatcgcggcattcaagatactcactgtcattgtc
aaggttcccttcaagaacgacgactctgccaatctgtacaaagttgcgctgaaggaagct
accaaggccatatccatgtcgcctaccaccacctctgacttggcgcaagcagctttgaag
ctcatctctgttatcctgcgtgacaggagggagattgtcatcaaggatgctgctctggac
atgctcctcggaaagctgaaggatgatctcaccgagcccttgtaccggcatgtaaccttc
aatttcttgcggtcagtcctggaccgcaagatggaaacggctgttgtttacgacacactc
gactacgtcggcactatcatgatcaccaaccctgacaaggacaccagagatctcgcgcgc
ggtgcatttttccagttcctccgagactatccacaaaagagaaacaggtgggaaaagcag
ctccagttcattgttgccaatctcaagtatgagcgcgaaggtggacgaatctctgttatg
gaggttatcaatctgttgctcaagaaatcggtggatgagttcgcacaagaagttgtggcc
acgtgcttcgttccgttgattttcgtcttggccaacgatgacagtgaaaagtgccgtctt
tctgcgggtgagctgctcaaggaatctttccgggtggctgacaaggagaggttgtccaag
tttatgcagttgttgaggacatggattcaacaggatgacaagcctgctgtttcgaagctc
gcgcttcatgcttggggtctctactttgaaggccgggagccaaatgtcaacgataagaag
gacctggctcttgttgttgacagaattactcaggttcttggggatgacgacgctctggag
gccgactgggagcttgccaacaccgcgctcaacactctgcaaacgcttgttatcaagcat
cctcagaaggccctcgctccgagcacgtccgagctgtggaccgaagtccagacttgcctc
gcgcactccaacacaaccgtcaaactcacagccacaagactcttgtccatgtacctcacc
gactttgccaaaacctctggcagggatgcgaagctcccactcaagggctcgtatggcctc
gagctcgacgaagacgacgtcaccgctttggtacgcctttctctcggcatcctcaacgtc
gtcgagctagacgagactctcgcacaggaaattgcccaagtcctccagttcctaggcggt
tacctcgagtccggcaagaccgaacaggaagacagcgacgaggaggaagacgaagacgaa
gaagacaaagtggacaagtctgtctcccgcaaggcagacatgaagtacctcttctggaag
ctctgctccatcgtcagaaaagaacgccagcccaagcccgaagcgatggtgtccaagctt
gcggcgatggatttgctcgaagcgttctgcatcaagtcccccaaggagacggtcgaggtt
tcggttaggaccattctccgtccgttaaggaacctgactgacccgtccattcgcgcgccg
ttctcgttgaacgagcttttcaagacgaggtatgaggctttgaagagcaaggctgtggcg
gtgatggaggtgttgcagaggaagctggggagcgcggagtacaccaaggcgttgctggag
gtgggcgaccagattagggaaaggaggcaggcgaggttgagcaagaggaggatcgaggcg
gtggcggcgccggagaggtatgggagggagaagaggaagaagtttgagaagaagaaggag
aggaggaagatcaaggggcaggagcagagggatgccaggagggcttttcaggggaattag
DBGET
integrated database retrieval system
