Podospora pseudopauciseta: QC763_107900
Help
Entry
QC763_107900 CDS
T09815
Symbol
NSP1
Name
(RefSeq) FG-nucleoporin nsp1
KO
K14306
nuclear pore complex protein Nup62
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC763_107900 (NSP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_107900 (NSP1)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC763_107900 (NSP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
DUF2935
ATG17_like
Exonuc_VII_L
DUF4200
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
87927714
NCBI-ProteinID:
XP_062770317
LinkDB
All DBs
Position
1:complement(2913696..2916991)
Genome browser
AA seq
684 aa
AA seq
DB search
MSFTFGTPSSNAGSGAANTSAAPAGGSIFGAASGATGTTGTPSFSFGDPSSAAVGSTTPA
GGSLFGNTTAAGAAKPAGSLFGTAGASTAAPATGGGLFGGGAGASAGGSLFAKPAGTTGT
TGTTGAMFGGASTAAPAATTAAPSSLFNSATAAAPAKPLFGGAAPAASGTTTGTPTTAAG
GLFGGASTTPTTAAAAKPAGSSLFAGAGGSGGSLFAGATGAGATSTPAKPLFGGAAAGGL
GSTTPAGAPPADAAKPAAGSLFSTANTTTKPAVTAPAAGGLFGATTAPAASNLFAPKPAT
TAAPATTAPAASTPATGGLFSNPAATTAPAATTAAATTAPAAGGLFGAGAATTTAPAGAS
KPAGTLFGTGTPATTSAATTSATPAATTAPATGGLFGAPAAGTTAPAATTAAATSSAPAA
GGLFGPKPAATTTTTTSGLTPSNPAQTAANLTASTLGPASQLPRLKNKTMDEIITRWATD
LSKYQKEFKEQANKVSEWDRMLVENGEKIQRLFNSTHEAERASNEIERQLQGVESQQEEL
GAWLDRYEQELDELYAKQGVNLAREEQITGPDQERERTYKLAEKLTDRLDDMGKDLTKMI
KEINDMSGSLGRGGMSDDPLSQIVRVLNSHLTQLQWIDTNAKALQAKVQAAQKTTGNMGG
GSVKETESNAAESFYRSYRGGGFK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcacattcggcacaccatcatccaacgctggctcgggtgcggcgaacacctca
gcggcgccggctgggggtagcatattcggagcagcttcaggagctacaggaaccacagga
actccatcattctctttcggcgacccaagttcagccgcggttggatcgaccacaccagcc
ggcggtagtctttttggcaacacaacagccgccggcgccgcgaaaccggctgggagtctt
tttggcaccgccggagcctcgactgcagcgcctgccaccggaggaggcctgtttggaggg
ggtgctggagcttcagcaggaggcagtttattcgccaagcctgctgggacaacagggacg
actggaactactggggcgatgtttggaggtgcttcgactgctgccccggccgccacgaca
gcagctccatcgtccctgtttaacagtgcaactgctgccgctccagcgaagccgcttttt
ggaggtgctgctcctgccgcctctggcacgactacagggacaccaacaacggctgctggg
ggtttgtttggaggtgcgtcaaccacaccaacgactgccgccgccgcgaaaccagccggt
agctcactgtttgcaggtgccggcggcagtggaggaagtctgtttgcgggggccacaggt
gctggtgctacatcaactcccgctaagccattgttcggcggtgccgccgccggtggattg
ggctcaactaccccggccggcgctcctccagcggatgccgcgaagccagcagccggtagt
ttgttctcgacggctaataccacgacaaagcctgctgttactgccccggccgccgggggc
ctatttggtgcaacaaccgccccggcggccagcaatctctttgcacccaagccggctacc
actgcagctcctgccaccaccgcccctgctgcttcgacaccggcaactggtggtcttttc
tcaaaccctgctgcaactactgctcccgccgcgacaactgctgctgccactacggcccca
gcggccgggggtctctttggtgctggagctgctactactacggccccagcgggtgcttcc
aagccagccggcactctgttcggaacgggaaccccggcgaccacctcggcggctactacc
tccgccacaccagccgctaccacggccccggcaaccgggggtctcttcggagctcccgcg
gcgggcaccacagcgcctgctgccaccacagctgctgctacttcctctgctcccgcagct
ggaggtctcttcggacccaagcccgcggctacaaccacgaccaccacctccggcctcaca
ccctccaacccagcccagacagccgccaacctcacagcctccaccctcggccccgcctcc
cagctcccccgtctcaagaacaagaccatggacgagatcatcacccgctgggcgacagac
ctgtccaaataccaaaaggaattcaaagagcaagccaacaaggtctcggagtgggatcgc
atgctcgtcgaaaacggcgagaagatccagcgcctgttcaactccacccacgaagcggag
cgcgccagcaacgagattgagcgtcagctccagggggtggagagccagcaggaggagctg
ggggcctggctggacaggtatgagcaggagctggacgagctgtatgccaagcagggggtg
aatttggcgcgggaggagcagatcacggggccggatcaggagagggagagaacgtacaaa
ctggcggagaagctgacggatcggctggacgatatgggcaaggatttgacaaagatgatc
aaggagattaatgacatgagtgggagtttggggaggggagggatgagtgatgatccgctc
tctcagattgtccgcgtcttgaacagccacttgacgcagctgcagtggatcgacaccaac
gccaaggctctccaggccaaggtccaggccgcgcagaagacgacggggaatatgggcggt
gggagtgtcaaggagacagagagcaatgctgccgagagcttttatcggtcctatcggggg
ggcggtttcaagtaa
DBGET
integrated database retrieval system
