Podospora pseudopauciseta: QC763_108250
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Entry
QC763_108250 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_108250
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC763_108250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_HPS5
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
87927751
NCBI-ProteinID:
XP_062770357
LinkDB
All DBs
Position
1:3016481..3021686
Genome browser
AA seq
1513 aa
AA seq
DB search
MAFGFGNASNAMMGAPSAGGVGGLSQGSDLEVIQTEGLGFLSLAGDSKVQLTSKWQPAPA
PTASLLSIAPRKGLVAAASPDAVNIATTESVRKAFEAPKNGDSDVRPFTPQAKVPLGIRI
SQLAFTVDEQFLILSAESGGGLAVYNTDTLTQGGTQSAFEIPTNSESLRALVPNPSPDLS
HFVAIVTDKGNLLMANLAEKKLVSGANGPVLRSQVSCVSWSTKGKQLVAGVADGSIYQMT
PEGVEKAHIPKSPSVGEYHVASLAWIENHVFLAIYNQTNGQDPSVFNLITRHQPPGGTPT
FTYQKITDPVEPFVADKTPHHTILRLKDFPPNLDECLLVASTANEGIGLLTRSKTPLTQD
KDADKITNVFTTTEFADDSKRAQLPMGEDLTDTFPIGATLDLSSKEKVYKPIPTDEIENS
PGPLPGLWVLNNEGVLVSWWVVYNESIRAGTTYPGIVGGSAAQAITPAAPVSSGVSAFGS
PAVASSGASAFGSPALASPGVSAFGEPSPAPAFGTPSSPAAFGGSSALGAKASPWATASG
TSAAPAFGSSAFGSKPAAAVPAFGAPAFGQPSAPAFGQSSLGFGAAKPSPWATGTTASAA
PAFGQSGLGSSAAAAGKVFGSGAAPPAGGFASFASKGGFGSLGGASSGSSIFGSKPAGSA
PAPEVSMDTPTAFPPPAAKTDRPAFGASPFVLGSTFKADASSAASAFETKKPEGSSMFGS
GFSSALEAPASKDEDMDRVTPAPEEKPKSVFGDLGSTTPTSTPAPSKFGFQTSGAEAAKT
TLFAPKASAPTSSIFGTPGPASSGLFKPKPETDLFGQPKPAANPFGAPTPAAANVFGSPK
PAENPFGAPRIKQEESDKENVKSVPAAPLPPDATNTKAPVKAEEAPLPPDFMKPGPPSKE
TSKSPGFSESDTGRMPPNLLSSKPKPEVYDVKPPTPEEAPLPPDFIGKPATKLPDVPAVP
ESPDESELSECDAEDQTHELEEGEVDEEEEEYDEEESEGSGVDVTKEFSPTAGGFESHTP
GITPHGSFDGGMTGSAFSTISRSEANQGRPLFGEINTRNAPSFPKPVPTSPRSPSPMRGP
PRASLLRPGPPDTPRSFAPGVASDLLGRRSAPPATSPFGSAPASRARPQEVDPNIKAQMR
LAAKREEEAKQALVDPEDEGIQQLLRSKIEPTLQIDEFLATDTRLKEIEKRGENEIPAAC
EALWRDINRMIDRLGLNSRALQSFILGHTTLHKEDGRDQDDLEHSDDWVLVEAEDLGKII
DNQLSRRLEEGRIQEINRVEDEISGLMRDLTKLRAKEEDMRKIIMAHVDPDQVNVAKSLP
LSAEQAAQQNELRRSFATFSRLLAEAEEALTLLKAKITSAGGASGRAPVPTVDAILRTIQ
KMTSMAEKRSGDIDVLENQMRRLRLGTPARSREGSPFVGGGGPATPTPNNRRSLLMSPGR
GESPFGASVRMGSVGPGGGGGVGPSPRKKLSQFSEEEKKVLRERERRRKNVLGLLRGSLE
RTGGNVSRLRDDE
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggctttcggttttggaaacgcgagcaatgccatgatgggcgcaccttccgctggcggg
gtgggggggttgtcgcaaggaagcgatctcgaggttatccagacagagggtcttggattt
ctctctctcgccggcgattcaaaggttcagttgacctcaaaatggcagcctgctccagcc
ccaacggcatcccttcttagcattgcccctcgaaagggtctggttgctgcggccagccca
gatgcggtaaacatcgccacaaccgagtctgtacggaaagcgttcgaggcccctaagaat
ggcgatagcgacgtccgaccgttcacaccccaggccaaagtaccgcttggcatcaggatc
tcacagttagccttcaccgtggatgaacaattcctcattctttccgccgagtcgggcggt
ggtcttgctgtctacaataccgacacgcttacacaaggcggcacgcaatccgccttcgaa
atacctacaaattcggaatctctcagggctctggttccaaatccttcaccggatctctcg
cacttcgtcgccatcgtgacggacaaaggcaacctcttgatggcgaaccttgcggagaag
aagcttgtatcgggcgcgaatgggccggtacttcgttcgcaagtcagctgtgtctcatgg
agcaccaagggaaaacagctggttgctggtgtagctgacggctccatctaccaaatgaca
cccgaaggtgtggaaaaggcacatattccaaagtcccccagtgttggagaataccatgtc
gcctcgttggcctggatcgagaaccacgtgttccttgctatttacaaccagacaaatggt
caagatccatctgttttcaacctaatcacccgccatcaaccaccaggaggaacacctacg
ttcacctatcagaagatcactgacccggtagagccttttgtggccgacaagacaccgcac
cacactatcctcaggctgaaggatttccccccaaatctcgacgagtgtttgctggttgcg
tcaacggccaatgaaggcattggtttattgacacgctccaagacccccttgacacaggac
aaggatgcggacaagatcacaaatgtgttcacaacaaccgagtttgctgacgattctaag
cgtgctcagctccctatgggcgaggacctgaccgatacgtttcctatcggagcgacgctc
gacctgtccagcaaggaaaaggtttacaagcccatcccgacggacgaaatcgagaactct
cccgggcctctccctggcctgtgggtgctcaataatgaaggcgtgcttgtgtcctggtgg
gttgtctataacgaatctattcgggccgggacaacgtatccgggcatcgtaggagggtcc
gccgctcaggcaatcacaccagcggccccagttagctctggcgtctctgcctttgggtct
cctgctgttgctagctctggagcttctgcttttgggtcccctgcccttgccagccctgga
gtctctgcctttggcgaaccctctcctgctccagctttcgggacaccgtcctctcccgcg
gcattcggtggttcctctgctttgggagccaaggcttcaccctgggctaccgcatcaggt
acatcagctgccccagcgtttggttccagcgcgttcggtagtaaaccagctgctgctgta
cctgcgttcggtgcccctgcttttggccagccatcggcccctgcgttcggccagagttca
ctaggatttggggcggctaagccttctccatgggccacgggaacaaccgcttctgcagca
cctgcctttggacagtcaggtttaggcagctcggcagccgccgccggtaaggtgttcggt
agcggtgctgctccaccagctggtggttttgccagttttgccagtaagggtggctttggg
tctctgggtggtgcttcttccggatccagcatcttcggatcaaagcctgctggctctgcc
cccgcccctgaagtctcaatggatacacctacagcattccctccgccggctgcgaagacg
gacagacccgcttttggggcttctccttttgtattgggaagtacattcaaggctgatgcc
tcaagtgctgctagtgcctttgaaactaaaaagccagaaggcagctccatgtttggaagt
gggttcagctctgccttggaagccccagcttccaaggatgaggatatggatagagtaacg
ccagcgcccgaggagaagcccaagtctgtatttggtgacctcggatctactacgccaaca
tcgacaccggccccctcgaagttcggcttccaaacttctggcgccgaagctgccaaaacc
accctatttgccccgaaggcctcggctcccacatctagtatctttggaactccaggacct
gcttcgtcggggctttttaagccaaagccagaaactgacctctttggtcaaccgaagcct
gctgctaatccttttggcgcaccgacacccgccgcggcaaatgtatttgggtcaccaaag
cctgcggaaaatcctttcggagcaccaaggatcaagcaagaggaaagcgataaagagaat
gttaagagtgttccggcggcccctctgccgccggatgcaactaataccaaagctcctgtg
aaagcagaggaggcgccactccctccggatttcatgaaaccaggccccccctcgaaggaa
acatccaagtcaccaggattcagtgaaagcgatactgggcggatgccccccaacctgctt
tcgagcaaaccgaagcctgaggtctacgatgtcaaaccacctacccctgaggaggctccc
ttgccgcctgactttatcggcaagcccgctactaaacttccggatgtccctgctgtgcca
gaaagccccgacgagagtgaactatcagaatgtgacgcggaagatcagactcacgaactt
gaggaaggtgaggttgatgaagaagaggaagagtacgatgaggaagaatcggaaggcagc
ggcgttgatgtgactaaggagttcagcccgacagctggcggttttgagagtcacactcct
ggcatcactccccatgggtcttttgatggtggcatgactggaagtgcgttctcgaccatt
tcaagatccgaggccaaccaaggtcgcccgctctttggcgagatcaacacgaggaacgcc
ccgtcgttccccaagccggtgccgacaagccctcgatcgccgagtccgatgcgaggtcca
cctcgggcgagccttctccggcctggtccccccgacactcctcggtcttttgcgccaggt
gttgcgtcggatctcttgggacgtcgctcagcacccccggctaccagcccgttcggttct
gctccagctagccgggcgcggccacaggaggtcgaccctaacattaaagcccagatgagg
ctcgcggccaagcgagaagaagaagccaagcaagccctcgtggatccggaagacgagggc
atccagcaacttctccgctccaaaattgagcccactctgcagattgacgagttcttggcg
acggacacaaggctcaaggagattgagaagcgcggagagaacgagatcccagctgcgtgc
gaggctctctggcgggatatcaaccgcatgattgatcgcctgggcctcaactcccgagcg
ctccagtctttcatcctcggccataccaccctccacaaggaggacggccgcgaccaggac
gatctcgaacactccgatgactgggtccttgtcgaagctgaagatctcggtaaaataatc
gacaaccaactctcccgtcgcctggaagagggccgcattcaagagattaaccgcgtcgaa
gatgagatttctggcctgatgcgggacctgaccaagctccgcgccaaagaagaagacatg
cgcaagatcatcatggcgcatgtcgaccccgaccaggtgaatgttgccaaatctttacct
cttagtgcggagcaggctgcgcagcagaatgagctcagacgatccttcgcgacgttttcg
cggctgttggcggaagcagaagaggcattgacgctgctcaaggcaaagattacttctgca
gggggtgcgagcggtagagcacctgttcctacggtggatgccatcttgagaacgattcaa
aagatgaccagcatggcggagaagaggagcggggatattgatgttttggagaaccagatg
aggaggttgaggttggggactccggcgaggagcagggaggggagtccgtttgttggtgga
ggagggccggccacgccgacgccgaataataggaggtcgttgttgatgagccccggcagg
ggggagtcgccttttggggcgtcggttaggatgggaagtgttggacctggcggcggtggt
ggggtggggcctagtccgaggaagaagttgagtcagtttagtgaggaggagaagaaggtg
ctgagggagagggagaggaggaggaagaatgtgttggggttgttgagggggagtttggag
aggacgggggggaatgttagtcggttgagggatgatgagtag
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