Podospora pseudopauciseta: QC763_108320
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Entry
QC763_108320 CDS
T09815
Symbol
CHC1
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp04142
Lysosome
ppsp04144
Endocytosis
ppsp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC763_108320 (CHC1)
04142 Lysosome
QC763_108320 (CHC1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
QC763_108320 (CHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsp04131
]
QC763_108320 (CHC1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsp04147
]
QC763_108320 (CHC1)
Membrane trafficking [BR:
ppsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
QC763_108320 (CHC1)
Exosome [BR:
ppsp04147
]
Exosomal proteins
Proteins found in most exosomes
QC763_108320 (CHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
TPR_Vps41
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
87927760
NCBI-ProteinID:
XP_062770366
LinkDB
All DBs
Position
1:3042234..3048259
Genome browser
AA seq
1683 aa
AA seq
DB search
MAAPNLPIKFQELLQLSSLGVGPTAITFNTCTLESDSYICIRDKKDEASSPEVIIVDLKN
GNNVIRRPIKADSAIMHWTRQVIALKAQSRTLQIFDLEQKQKLKSTQMSEDVAFWKWISE
TTLGLVTETSVYHWDVFDPTQAAPVKVFDRHSNLTNNQIINYRTSADGKWMAVVGISQQQ
GRVVGAMQLYSKDRGITQAIEGHAAAFGTIRLDGAPEDTKLFTFAVRTASGAKLHIVEID
HPETNPVFQKKAVDVFFPPEAGSDFPVALQVSQKYGIIYLITKYGFIHLYDLETATCIFM
NRISGETIFTACGDSNSTGIVGINRKGQVLFVSADENKIVPYVLESHGTELALKLASRAG
LPGADNLYQQRFEQLFSNGSYQEAAKVAANSPRGFLRTPQTIERFKRLPQQPGSMSHILQ
YFGMLLDKGALNQHETLELAQPVLAQNRKQLLAKWLEENKLECSEQLGDMVRPHDMPMAL
SIYLKGNVPNKVVAGFAELGQFDKILPYCTQTGYQPDFIQLLHHIVRVNPEKGAEFATAL
ANNEGGSLVDLERVVDIFQSQGMVQQATAFLLDALKDNKPEQGHLQTRLLEMNLLNAPQV
ADAILGNDMFSHFDKAQIAKLCEQAGLFQKALELYEDPAAIKRVVVGIAGAPNFNPEWLI
EYFGRLSVEQSIDCLDAMLKHNIRQNLQSVVQIATKYAELLGPQRLIDLLEKYKTAEGLY
YFLGSIVNVTDDSEVVFKYIEAATKTGQIREVERICRDNSVYNPEKVKNFLKEAKLSEML
PLMVVCDRFNFVHDLVLYLYQHQQFKSIEVYVQQVNPSRTPGVIGGLLDVDCDENIIKNL
LSTVNPVSIPIDELVQEVETRNRLKLLLPFLEATLAAGNQQQAVFNALAKIYIDSNNNPE
KFLKENDQYDTLTVGKYCEKRDPNLAYIAYSKGQNDLELVNITNENAMYKAQARYLLERG
DNDLWMFVLSENNLHRRSVVDQVISTAVPESTDPAKVSLAVQCFLSADLPAELIELLEKI
VLEPSPFSDNPNLQNLLMFTAAKADKARVMDYIHRLDNFSADEISNVCIEVGLFEEAFEV
FKKIDNKEAAVNVLVEHVVSIDRAQAYAEEVDIPQVWSRVAKAQLDGLRVSDSIESYIKA
EDPKNYEEVIEIAVAAGKNEELIKFLRMARKTLRESAIDTALAFCYARLDQLAELEDFLR
ATNVANIEESGDKAYAEGFFEAAKIFYTSISNWAKLATTLVHLEDYQAAVDCARKANNIK
VWREVHEACVSKKEFRLAQICGLNLIVDAEQLQALVKQYEREGYFDELISLLEQGLGLER
AHMGMFTELGIALSKYHPERLMEHLKLFWSRMNLPKMIRACEEANLWPELVFCYYHYDEF
DNAALAVMERPENSWEHQQFKEITVKVANLEIYYKAINFYLEQNPSLLTDLLQVLTPRID
VNRVVRMFQKSDNLPLIKPFLLNVQSQNKRTVNDAINDLLIEEEDYKTLRDSVENYDNYD
AVELAGRLEKHDLVFFRQIAANIYRKNKRWEKSINLSKQDKLWKDAIETAAISGKTDVVE
ELLRYFVDIGNRECYVGMLYACYDLIRPDLILELSWRNGLHDFTMPYMINLLCQQTKELA
ALKADNEARKAKEAAEKTEDDNTPILGMNRLMITAGPAQGRASPASFGGQTNGFAPQPTG
FGF
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcctaatctacccatcaaattccaggagctgctccagctcagcagcctgggt
gttgggccaactgctatcacattcaacacttgcacattagaatcagactcgtacatctgc
atccgagataagaaggatgaagcctcttcccccgaagtcatcattgtcgacctcaagaat
ggcaacaatgtcattcgccggcccatcaaggccgacagcgccatcatgcactggacgcgt
caggtcatcgccctcaaggcccaatcgcgaacactgcagatcttcgacctcgagcagaag
cagaagctcaagtcgacccagatgagcgaggacgtggccttctggaagtggatcagcgag
accacgcttggcttggtgacagagacatccgtctatcattgggatgtttttgatccgacc
caggcggcacctgtcaaggtgtttgaccgccacagcaacctcacaaataaccagatcatc
aactatcggacgagcgctgatggaaagtggatggccgtcgttggcatttcgcagcaacaa
ggccgcgttgttggagccatgcaactgtattcgaaagaccgcggcattacccaggccatt
gaaggccatgccgctgcctttggcactattcgtctcgacggtgcccccgaggacaccaag
ctgttcaccttcgccgtgcggaccgcctctggagccaaacttcacatcgtggaaattgac
cacccggaaacgaatcctgtcttccagaagaaggcagttgatgtgttcttcccgccagag
gccggcagtgacttccccgttgcgcttcaagtgtcacagaagtatggtatcatttatttg
atcaccaaatacggattcattcatctctacgacctcgaaactgctacatgtatcttcatg
aaccgcatctcgggcgagaccatcttcacagcttgtggcgacagcaattcgactggtatc
gtcggtatcaatcgcaagggtcaggtactcttcgttagcgccgatgaaaacaagatcgta
ccctatgtgttggaaagccacggcaccgagctggccctcaagctggcgtcgcgtgctggt
ctgcccggtgctgacaacctctatcagcaacggttcgagcagctgttcagcaacggaagc
taccaggaggctgctaaggtcgccgccaactcgccccgtggtttcctgcggacaccccag
acgatagagcgtttcaagcggcttccgcagcagcctggctccatgtcgcacatcttgcaa
tatttcggcatgcttcttgacaagggtgctctgaaccagcacgaaacccttgagcttgct
caacccgtgcttgcccagaaccggaaacagctcctggcgaagtggctggaagagaacaag
ctcgagtgctccgagcaacttggtgacatggtccgcccgcatgatatgcccatggccctc
agcatctacctgaagggcaatgtgcccaacaaggttgtcgctggctttgccgagttggga
cagtttgataagattctcccctactgcactcagactggctatcaaccagacttcattcaa
cttttgcaccacatcgtccgcgtgaacccagagaagggtgccgagttcgcgacagcactt
gccaacaatgaagggggctcgcttgttgacctcgagcgcgtcgtggatatcttccaatcg
cagggcatggtgcagcaggctaccgctttccttctcgatgctctcaaggacaacaagcct
gagcaaggccatctccagacccgcctcttggagatgaaccttctcaatgccccccaggtt
gctgatgctatcctcggcaacgacatgttctcccacttcgacaaggcgcagattgccaag
ttgtgcgagcaagcaggattgttccaaaaggctctggagctctacgaggaccccgcagcc
atcaagcgtgttgtcgtaggcattgccggggcgccaaacttcaaccccgagtggttaatt
gagtacttcggtcgcctttccgtcgagcaatccattgactgcctcgatgctatgttgaag
cacaatatccgccaaaacctccagtccgttgtgcagattgccaccaagtatgccgagctt
ctcgggccccagcgtcttattgacctgcttgagaagtacaagaccgccgaaggtctttac
tacttccttggtagcattgtcaacgttaccgatgattctgaggttgtcttcaagtacatc
gaggctgctaccaagacgggtcagatccgcgaggttgagcgcatttgccgtgacaacagc
gtctataacccagagaaggtcaagaacttcttgaaggaggccaagctcagcgagatgctt
ccactcatggtggtgtgcgatcgtttcaactttgtacacgacttggtcctctacttgtac
cagcaccagcagttcaagtccatcgaggtgtatgtgcagcaagtcaacccttcgaggact
cccggtgttattggcggcttgttggatgtcgactgcgatgagaacatcatcaagaacctt
ctcagcacagtcaacccagtatctatccccatcgatgagcttgtccaggaggtcgagacc
cgcaaccgtctcaagttgcttcttcccttcctcgaggcgaccctggctgctggcaatcag
cagcaggcagtgttcaacgctttggccaagatttacatcgactccaacaacaatcctgag
aagtttctcaaggagaacgaccagtacgacaccctcactgtcggaaagtattgcgagaag
cgcgatcccaacctcgcctacattgcctatagcaagggccagaacgaccttgagctcgtc
aacatcaccaacgagaacgccatgtacaaggcccaggccaggtacctgcttgagcgtggt
gataatgacctctggatgttcgttctcagcgagaacaacctccaccgccgatccgtggtc
gaccaagtcatctcgaccgctgttcccgagtcgacggatcccgccaaggtttctcttgcg
gttcaatgtttcctgagcgctgatcttccagctgagctcattgagctgctcgagaagatt
gtcttggagccatcacccttcagtgacaacccgaacttgcagaatttgctcatgttcact
gctgccaaggctgacaaggcccgcgtgatggattacattcatcgtcttgacaacttctcc
gcggatgagatttctaatgtctgcattgaggttggtctgttcgaggaagccttcgaggtt
ttcaagaagatcgacaacaaggaggcggctgtcaacgtactcgttgagcatgtggttagc
atcgatcgtgctcaggcttatgccgaggaggtcgacatccctcaggtttggagcagagtc
gccaaggctcagcttgacggtctccgtgtcagcgactcgatcgagtcttacatcaaggcg
gaggaccccaagaactacgaggaagttattgagatcgctgtggctgctggcaagaatgaa
gagctcatcaagttcctgcgcatggcccgcaagacccttcgcgagtctgccattgatact
gctcttgccttttgctatgctcgccttgatcaacttgccgagctcgaggacttcctgcgg
gctactaatgtcgccaacattgaagaatccggagacaaggcttacgccgagggcttcttc
gaggcggccaagatcttctataccagcatttccaactgggcgaagttggctaccacattg
gtacatcttgaggattaccaagctgctgttgactgcgcgcgcaaggccaacaacatcaag
gtctggagagaagtccatgaggcttgcgttagcaagaaggagttccgtctggcccagatc
tgcggtctcaaccttatcgttgacgctgagcagcttcaggctttggttaagcagtatgag
cgtgagggctactttgacgagctcatcagtcttcttgagcaaggtcttggcttggagcgt
gcccacatgggtatgttcactgagcttggcattgccctttccaagtaccaccctgagcgg
ttgatggagcacctcaagctcttctggagcagaatgaacctgcccaagatgatccgtgct
tgcgaggaggccaacctctggcctgagctggtcttctgctactaccattatgatgaattc
gacaacgctgctcttgcggttatggagcggccggaaaactcctgggagcaccagcagttc
aaggagatcaccgtcaaggttgccaaccttgagatctactataaggccatcaacttttac
cttgagcagaatccttcgctccttaccgaccttctccaggtcctcactcctcgcatcgat
gtcaaccgtgttgtccgcatgttccagaagtccgacaacttgcctctgatcaaaccattc
ttgctcaacgttcagtcgcagaacaagcgcactgttaacgatgccatcaacgatcttctg
atcgaggaggaggactacaagactctccgcgactctgtcgagaactacgacaactatgac
gctgtcgagctcgccggccgcctcgagaagcacgatctcgtcttcttccgccaaattgcc
gctaacatctaccgcaagaataagcgctgggagaagtcgatcaacctatccaagcaggac
aagttgtggaaggatgccattgagactgctgctatctctggcaagaccgatgttgtcgag
gagcttctccgttatttcgtcgacattggcaacagggagtgctacgtcggcatgctttat
gcctgctatgacctcatccgccccgatcttatcctggagctctcttggcgcaacggcctc
catgacttcactatgccgtacatgatcaacctcctctgccagcaaaccaaggagttggcc
gccctcaaggctgacaacgaggctcgcaaggccaaggaggctgccgagaagaccgaggat
gacaacacccccatcctgggcatgaaccgcctcatgatcaccgctggtcccgctcaaggc
cgggcctctcccgcgtcttttggcggacaaaccaacggatttgcgccccaacctaccggt
ttcggattctag
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integrated database retrieval system
